RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 PTPN6P29350 595 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 ADSLP30566 484 aaPredicted RBP11.3□□□□□ -0.6
MRPL55-209ENST00000366735 XKP51811 444 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 WNT3P56703 355 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 PSPHP78330 225 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 TRAF3Q13114 568 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 PDCD2Q16342 344 aaPredicted RBP11.3□□□□□ -0.6
MRPL55-209ENST00000366735 EIPR1Q53HC9 387 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 WIPI1Q5MNZ9 446 aaPredicted RBP11.3□□□□□ -0.6
MRPL55-209ENST00000366735 BICRALQ6AI39 1079 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 AAGABQ6PD74 315 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 RNF165Q6ZSG1 346 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 NUP54Q7Z3B4 507 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 IFNEQ86WN2 208 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 PRR22Q8IZ63 422 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 MMP21Q8N119 569 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 ZNF615Q8N8J6 731 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 FAM83FQ8NEG4 500 aaPredicted RBP11.3□□□□□ -0.6
MRPL55-209ENST00000366735 OR14L1PQ8NHC6 308 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 CEP70Q8NHQ1 597 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 WDR20Q8TBZ3 569 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 SMPDL3BQ92485 455 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 UCN3Q969E3 161 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 ADIPOR1Q96A54 375 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 WDYHV1Q96HA8 205 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 C18orf12Q96KH6 178 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 OR52B2Q96RD2 323 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 BRINP2Q9C0B6 783 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 NMUR2Q9GZQ4 415 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 PIGMQ9H3S5 423 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 NOL11Q9H8H0 719 aaKnown RBP11.3□□□□□ -0.6
MRPL55-209ENST00000366735 MRGBPQ9NV56 204 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 PRODH2Q9UF12 536 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 NDRG3Q9UGV2 375 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 BCAP29Q9UHQ4 241 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 PSME2Q9UL46 239 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 DNAJC15Q9Y5T4 150 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 A0A1B0GTL3 188 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 SH3D21A4FU49 640 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 ARHGEF9O43307 516 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 HNRNPCL1O60812 293 aaKnown RBP11.29□□□□□ -0.6
MRPL55-209ENST00000366735 CHEK2O96017 543 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 GBAP04062 536 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 CT62P0C5K7 136 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 CPN1P15169 458 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 EPHA3P29320 983 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 MAPK12P53778 367 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 GAB1Q13480 694 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 LSM12Q3MHD2 195 aaKnown RBP11.29□□□□□ -0.6
MRPL55-209ENST00000366735 CCNYL2Q5T2Q4 361 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 FNDC7Q5VTL7 733 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 SHEQ5VZ18 495 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 FRG2Q64ET8 278 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 CLEC6AQ6EIG7 209 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 POMZP3Q6PJE2 187 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 TMEM64Q6YI46 380 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 OR52B6Q8NGF0 335 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 LINC01560Q8TB33 94 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 TWIST2Q8WVJ9 160 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 TMCO6Q96DC7 493 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 LCORQ96JN0 433 aaPredicted RBP11.29□□□□□ -0.6
MRPL55-209ENST00000366735 FRG2BQ96QU4 278 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 FAIM2Q9BWQ8 316 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 ELOVL6Q9H5J4 265 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 ZNF385DQ9H6B1 395 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 WDR55Q9H6Y2 383 aaPredicted RBP11.29□□□□□ -0.6
MRPL55-209ENST00000366735 NMRK1Q9NWW6 199 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 JKAMPQ9P055 326 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 TRPS1Q9UHF7 1281 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 RNF11Q9Y3C5 154 aa11.29□□□□□ -0.6
MRPL55-209ENST00000366735 ACANP16112 2415 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 PRAMEF25A6NGN4 478 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 KDM4EB2RXH2 506 aaPredicted RBP11.28□□□□□ -0.6
MRPL55-209ENST00000366735 PGRMC2O15173 223 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 CRCPO75575 148 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 CBR3O75828 277 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 BCAS2O75934 225 aaPredicted RBP11.28□□□□□ -0.6
MRPL55-209ENST00000366735 OR4F21O95013 312 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 RCBTB2O95199 551 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 ATP1B1P05026 303 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 KLK1P06870 262 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 ABCB1P08183 1280 aaPredicted RBP11.28□□□□□ -0.6
MRPL55-209ENST00000366735 T-ENOLP0DO92 83 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 CSNK2A2P19784 350 aaPredicted RBP11.28□□□□□ -0.6
MRPL55-209ENST00000366735 KRT20P35900 424 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 FOXA1P55317 472 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 IRX1P78414 480 aaPredicted RBP11.28□□□□□ -0.6
MRPL55-209ENST00000366735 LSM11P83369 360 aaKnown RBP eCLIP11.28□□□□□ -0.6
MRPL55-209ENST00000366735 GGTA1PQ4G0N0 100 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 XKR7Q5GH72 579 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 DCST1Q5T197 706 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 LETMD1Q6P1Q0 360 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 LARP4Q71RC2 724 aaKnown RBP eCLIP11.28□□□□□ -0.6
MRPL55-209ENST00000366735 CHMP1BQ7LBR1 199 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 MILR1Q7Z6M3 343 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 YRDCQ86U90 279 aaKnown RBP11.28□□□□□ -0.6
MRPL55-209ENST00000366735 C9orf106Q8NAJ2 232 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 OR4F6Q8NGB9 312 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 KLHL29Q96CT2 875 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 OMA1Q96E52 524 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms