RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 KCNJ15Q99712 375 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 BHLHE41Q9C0J9 482 aaPredicted RBP18.44■□□□□ 0.54
TRIM58-201ENST00000366481 CERS4Q9HA82 394 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 TRIOO75962 3097 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 OR12D1P0DN82 309 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 ARAFP10398 606 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 GBX2P52951 348 aaPredicted RBP18.43■□□□□ 0.54
TRIM58-201ENST00000366481 SLC16A1P53985 500 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 TRILQ7L0X0 811 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 TECPR1Q7Z6L1 1165 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 AMER3Q8N944 861 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 MRGPRX3Q96LB0 322 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 HEXA-AS1Q9H8Q6 139 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 SDHAF2Q9NX18 166 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 TMEM5Q9Y2B1 443 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 STK25O00506 426 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 KDM4BO94953 1096 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 MT-ND4P03905 459 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 SRPRAP08240 638 aaKnown RBP18.43■□□□□ 0.54
TRIM58-201ENST00000366481 PITPNBP48739 271 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 KCNC3Q14003 757 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 ZNF805Q5CZA5 627 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 C3orf38Q5JPI3 329 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 TMEM201Q5SNT2 666 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 ZDHHC20Q5W0Z9 365 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 TMEM107Q6UX40 140 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 SDR16C5Q8N3Y7 309 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 FAM26EQ8N5C1 309 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 SLC38A5Q8WUX1 472 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 SLC38A2Q96QD8 506 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 FBXW2Q9UKT8 454 aa18.43■□□□□ 0.54
TRIM58-201ENST00000366481 TRDV1A0A1B0GX56 115 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 RPS10-NUDT3A0A1W2PQS6 291 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 H7BY64 318 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 ALDOBP05062 364 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 BUD31P41223 144 aaPredicted RBP18.42■□□□□ 0.54
TRIM58-201ENST00000366481 TMEM91Q6ZNR0 172 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 ZNF547Q8IVP9 402 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 SPRYD4Q8WW59 207 aaPredicted RBP18.42■□□□□ 0.54
TRIM58-201ENST00000366481 PRAP1Q96NZ9 151 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 LRRC3BQ96PB8 259 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 POLDIP3Q9BY77 421 aaKnown RBP18.42■□□□□ 0.54
TRIM58-201ENST00000366481 TTYH1Q9H313 450 aaPredicted RBP18.42■□□□□ 0.54
TRIM58-201ENST00000366481 TMEM38AQ9H6F2 299 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 RASD1Q9Y272 281 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 AP1M2Q9Y6Q5 423 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 PPM1BO75688 479 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 GATBO75879 557 aaKnown RBP18.42■□□□□ 0.54
TRIM58-201ENST00000366481 H2AFB2P0C5Z0 115 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 ACP2P11117 423 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 MMP11P24347 488 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 HIST2H2AA3Q6FI13 130 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 SLC36A4Q6YBV0 504 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 OR4D11Q8NGI4 311 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 MS4A3Q96HJ5 214 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 RNF32Q9H0A6 362 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 HELZP42694 1942 aaKnown RBP18.42■□□□□ 0.54
TRIM58-201ENST00000366481 NPIPB8E9PQR5 432 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 EIF4EP06730 217 aaKnown RBP18.42■□□□□ 0.54
TRIM58-201ENST00000366481 PLA1AQ53H76 456 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 SFRP4Q6FHJ7 346 aaPredicted RBP18.42■□□□□ 0.54
TRIM58-201ENST00000366481 FAM71E1Q6IPT2 247 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 ADGRG3Q86Y34 549 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 ZNF527Q8NB42 609 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 UXS1Q8NBZ7 420 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 OR9A1PQ8NGU1 263 aa18.42■□□□□ 0.54
TRIM58-201ENST00000366481 QRSL1Q9H0R6 528 aaKnown RBP18.42■□□□□ 0.54
TRIM58-201ENST00000366481 SF3B6Q9Y3B4 125 aaKnown RBP18.42■□□□□ 0.54
TRIM58-201ENST00000366481 COL4A6Q14031 1691 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 PLXND1Q9Y4D7 1925 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 ANHXE9PGG2 379 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 GPR171O14626 319 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 PRODHO43272 600 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 APOC3P02656 99 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 IRS1P35568 1242 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 MMP12P39900 470 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 SLC1A3P43003 542 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 SMIM11AP58511 58 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 KIAA1024LP59773 190 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 RAB40BQ12829 278 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 GRM7Q14831 915 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 CCNJQ5T5M9 372 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 NXPE4Q6UWF7 544 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 SLC39A5Q6ZMH5 540 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 KLHL36Q8N4N3 616 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 NXPE3Q969Y0 559 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 DDOQ99489 341 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 GHITMQ9H3K2 345 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 OSGEPL1Q9H4B0 414 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 EXOSC1Q9Y3B2 195 aaKnown RBP18.41■□□□□ 0.54
TRIM58-201ENST00000366481 hCG_1807616A0A1W2PRN6 198 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 RHOP08100 348 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 LIMS3P0CW19 117 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 LIMS4P0CW20 117 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 LAG3P18627 525 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 FAM27D1Q5T7N8 215 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 CD276Q5ZPR3 534 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 ARL9Q6T311 187 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 ALKAL2Q6UX46 152 aa18.41■□□□□ 0.54
TRIM58-201ENST00000366481 ZER1Q7Z7L7 766 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms