RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 FAM45AQ8TCE6 357 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 C3orf49Q96BT1 292 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 ZMYND19Q96E35 227 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 CERS2Q96G23 380 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 ADAD1Q96M93 576 aaKnown RBP7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 KLHDC3Q9BQ90 382 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 CAPS2Q9BXY5 557 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 SMYD2Q9NRG4 433 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 FBXO34Q9NWN3 711 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 BCAP29Q9UHQ4 241 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 CES1P1Q9UKY3 287 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 GPR55Q9Y2T6 319 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 RYR3Q15413 4870 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 TMEM89A2RUT3 159 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 ZNF814B7Z6K7 855 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 H7C417 338 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 ABCD4O14678 606 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 TMPRSS2O15393 492 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 SCO2O43819 266 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 CXCL13O43927 109 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 FADS1O60427 444 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 CCNT2O60583 730 aaKnown RBP7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 REM1O75628 298 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 ADAP00813 363 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 FGGP02679 453 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 PROCP04070 461 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 PCSK2P16519 638 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 HNF1AP20823 631 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 PIK3R1P27986 724 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 NR4A2P43354 598 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 EIF1AXP47813 144 aaKnown RBP7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 RAP1GDS1P52306 607 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 CTBP2P56545 445 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 EEFSECP57772 596 aaKnown RBP7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 MRPS35P82673 323 aaKnown RBP7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 MAP4K2Q12851 820 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 STX5Q13190 355 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 LAPTM5Q13571 262 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 RAB35Q15286 201 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 HIST2H2ACQ16777 129 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 PAGE2BQ5JRK9 111 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 HP1BP3Q5SSJ5 553 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 AGAP6Q5VW22 663 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 FAM219BQ5XKK7 198 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 HIST2H2AA3Q6FI13 130 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 TFAP2EQ6VUC0 442 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 FRA10AC1Q70Z53 315 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 GALNT10Q86SR1 603 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 ADAMTSL2Q86TH1 951 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 TMEM139Q8IV31 216 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 NKAPQ8N5F7 415 aaKnown RBP7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 OR4K14Q8NGD5 310 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 OR10D3Q8NH80 312 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 HSD17B8Q92506 261 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 EFHD2Q96C19 240 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 TMCO6Q96DC7 493 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 C1GALT1C1Q96EU7 318 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 FOXN4Q96NZ1 517 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 CBLN4Q9NTU7 201 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 LYARQ9NX58 379 aaKnown RBP7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 XPR1Q9UBH6 696 aa7.5□□□□□ -1.21
HMGB1P39-201ENST00000366304 GOLGA8QA0A0J9YX86 632 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 FAM95CA0A1B0GW59 222 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 LRP5LA4QPB2 252 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 GOLGA8OA6NCC3 632 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 GOLGA8NF8WBI6 632 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 FAM229AH3BQW9 127 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 GOLGA8RI6L899 631 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 EIF1AYO14602 144 aaKnown RBP7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 GMFGO60234 142 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 PIAS1O75925 651 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 PLGP00747 810 aaPredicted RBP7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 FCGR2AP12318 317 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 APEHP13798 732 aaKnown RBP7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 PORP16435 677 aaPredicted RBP7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 SHC1P29353 583 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 FEN1P39748 380 aaKnown RBP7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 EFNA4P52798 201 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 GPX6P59796 221 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 SGCBQ16585 318 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 SPANXN3Q5MJ09 141 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 RNASEH2BQ5TBB1 312 aaKnown RBP7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 LGSNQ5TDP6 509 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 CYP20A1Q6UW02 462 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 LARP4Q71RC2 724 aaKnown RBP eCLIP7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 ZC3HC1Q86WB0 502 aaKnown RBP7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 PDPRQ8NCN5 879 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 OR52B6Q8NGF0 335 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 BTBD9Q96Q07 612 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 MCMBPQ9BTE3 642 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 CD244Q9BZW8 370 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 BRINP2Q9C0B6 783 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 DERL2Q9GZP9 239 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 STMN4Q9H169 189 aaPredicted RBP7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 YY1AP1Q9H869 796 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 CAB39LQ9H9S4 337 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 ZKSCAN5Q9Y2L8 839 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 PCNX3Q9H6A9 2034 aa7.49□□□□□ -1.21
HMGB1P39-201ENST00000366304 A0A0J9YW62 118 aa7.48□□□□□ -1.21
HMGB1P39-201ENST00000366304 TNFSF11O14788 317 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms