RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 RHOP08100 348 aa13.1□□□□□ -0.31
COL6A1-201ENST00000361866 PRAMEF17Q5VTA0 474 aa13.1□□□□□ -0.31
COL6A1-201ENST00000361866 KIF18BQ86Y91 864 aa13.1□□□□□ -0.31
COL6A1-201ENST00000361866 FCAMRQ8WWV6 532 aa13.1□□□□□ -0.31
COL6A1-201ENST00000361866 RIT1Q92963 219 aa13.1□□□□□ -0.31
COL6A1-201ENST00000361866 LYARQ9NX58 379 aaKnown RBP13.1□□□□□ -0.31
COL6A1-201ENST00000361866 MSRAQ9UJ68 235 aa13.1□□□□□ -0.31
COL6A1-201ENST00000361866 MKL2Q9ULH7 1088 aa13.1□□□□□ -0.31
COL6A1-201ENST00000361866 CEP290O15078 2479 aa13.1□□□□□ -0.31
COL6A1-201ENST00000361866 CACNA1IQ9P0X4 2223 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 HYKKA2RU49 373 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 SLC22A31A6NKX4 558 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 CD2P06729 351 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 TIMP2P16035 220 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 POLR2CP19387 275 aaPredicted RBP13.09□□□□□ -0.31
COL6A1-201ENST00000361866 SDHBP21912 280 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 MMP11P24347 488 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 PSMB10P40306 273 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 ETV5P41161 510 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 VIPR2P41587 438 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 ETV1P50549 477 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 RRAS2P62070 204 aaPredicted RBP13.09□□□□□ -0.31
COL6A1-201ENST00000361866 ZNF750Q32MQ0 723 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 PLK5Q496M5 336 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 ACSM5Q6NUN0 579 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 OR5W2Q8NH69 310 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 SETD7Q8WTS6 366 aaKnown RBP13.09□□□□□ -0.31
COL6A1-201ENST00000361866 ZNF582Q96NG8 517 aaPredicted RBP13.09□□□□□ -0.31
COL6A1-201ENST00000361866 ZNF471Q9BX82 626 aaPredicted RBP13.09□□□□□ -0.31
COL6A1-201ENST00000361866 TRPV4Q9HBA0 871 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 CENPMQ9NSP4 180 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 TFPIP10646 304 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 ACP2P11117 423 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 HOXA9P31269 272 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 HOXD11P31277 338 aaPredicted RBP13.09□□□□□ -0.31
COL6A1-201ENST00000361866 SLC6A6P31641 620 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 MAP3K8P41279 467 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 SLC1A3P43003 542 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 ACSM3Q53FZ2 586 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 C12orf76Q8N812 135 aaPredicted RBP13.09□□□□□ -0.31
COL6A1-201ENST00000361866 ACOT12Q8WYK0 555 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 EID2BQ96D98 161 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 GPER1Q99527 375 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 SYNPO2LQ9H987 977 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 ZSCAN32Q9NX65 697 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 LIPT1Q9Y234 373 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 PPP1R3DO95685 299 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 MAS1P04201 325 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 TAS2R43P59537 309 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 CDC20Q12834 499 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 LIMS2Q7Z4I7 341 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 GPALPP1Q8IXQ4 340 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 CCDC36Q8IYA8 594 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 C7orf61Q8IZ16 206 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 C5orf34Q96MH7 638 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 OPALINQ96PE5 141 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 ABCG4Q9H172 646 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 RC3H2Q9HBD1 1191 aaKnown RBP13.09□□□□□ -0.31
COL6A1-201ENST00000361866 FZD3Q9NPG1 666 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 RAD1O60671 282 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 ZNF33BQ06732 778 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 ILF3Q12906 894 aaKnown RBP eCLIP13.09□□□□□ -0.31
COL6A1-201ENST00000361866 ENPP2Q13822 863 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 GAS6Q14393 721 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 PYHIN1Q6K0P9 492 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 FAHD1Q6P587 224 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 LRRN1Q6UXK5 716 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 ERN2Q76MJ5 926 aaKnown RBP13.09□□□□□ -0.31
COL6A1-201ENST00000361866 GALNT11Q8NCW6 608 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 TMEM163Q8TC26 289 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 NSMAFQ92636 917 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 TCEAL4Q96EI5 215 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 CHFRQ96EP1 664 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 PRRC1Q96M27 445 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 PRDM9Q9NQV7 894 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 POT1Q9NUX5 634 aa13.09□□□□□ -0.31
COL6A1-201ENST00000361866 C13orf42A0A1B0GVH6 325 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 C1orf226A1L170 272 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 OR6C74A6NCV1 312 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 ARPC1BO15143 372 aaKnown RBP13.08□□□□□ -0.32
COL6A1-201ENST00000361866 SCO1O75880 301 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 TFP02787 698 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 GTF2F2P13984 249 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 SNRPBP14678 240 aaKnown RBP13.08□□□□□ -0.32
COL6A1-201ENST00000361866 NPPBP16860 134 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 IL1RNP18510 177 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 MGAT3Q09327 533 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 KIAA0040Q15053 153 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 CCDC157Q569K6 752 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 ELP2Q6IA86 826 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 IQCF2Q8IXL9 164 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 OR2A12Q8NGT7 310 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 OR6N2Q8NGY6 317 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.08□□□□□ -0.32
COL6A1-201ENST00000361866 FBXL12Q9NXK8 326 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 ASIC5Q9NY37 505 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 TAS2R3Q9NYW6 316 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 A0A0G2JMP0 313 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 A0A0X1KG70 313 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 A0A1W2PP55 124 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms