RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 PPM1NQ8N819 430 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 COPS7BQ9H9Q2 264 aaPredicted RBP5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 SERHLQ9NQF3 203 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 EHD3Q9NZN3 535 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 ZNF337Q9Y3M9 751 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 LILRA1O75019 489 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 IGLV1-44P01699 117 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 BMP4P12644 408 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 MAGEA1P43355 309 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 ATP6V0D1P61421 351 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 UBA52P62987 128 aaKnown RBP5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 COL10A1Q03692 680 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 SLAMF1Q13291 335 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 STK11Q15831 433 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 P4HA3Q7Z4N8 544 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 GCNT2Q8N0V5 402 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 OR2V1Q8NHB1 315 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 SKA2Q8WVK7 121 aaPredicted RBP5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 PYCR2Q96C36 320 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 KATNB1Q9BVA0 655 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 CACNG6Q9BXT2 260 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 RASSF4Q9H2L5 321 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 METTL7AQ9H8H3 244 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 MALT1Q9UDY8 824 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 SONP18583 2426 aaKnown RBP5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 EFCAB8A8MWE9 144 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 NDUFS7O75251 213 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 SYF2O95926 243 aaKnown RBP5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 AHSGP02765 367 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 CCDC166P0CW27 439 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 APEHP13798 732 aaKnown RBP5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 PORP16435 677 aaPredicted RBP5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 AGFG1P52594 562 aaKnown RBP5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 PPA1Q15181 289 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 FAM209AQ5JX71 171 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 SAXO2Q658L1 398 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 REP15Q6BDI9 236 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 FBXL14Q8N1E6 418 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 ZNF525Q8N782 197 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 MAPK1IP1LQ8NDC0 245 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 OR7G3Q8NG95 312 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 FAM111AQ96PZ2 611 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 KRT12Q99456 494 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 SOX7Q9BT81 388 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 C1QTNF3Q9BXJ4 246 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 CD244Q9BZW8 370 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 CCDC68Q9H2F9 335 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 BRF2Q9HAW0 419 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 NSMCE4AQ9NXX6 385 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 VWA7Q9Y334 891 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 HYOU1Q9Y4L1 999 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 CNTRLQ7Z7A1 2325 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 NINQ8N4C6 2090 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 MALRD1Q5VYJ5 2156 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 RYR2Q92736 4967 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 C1orf226A1L170 272 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 CCDC151A5D8V7 595 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 B4DSR2 109 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 B9A039 149 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 ALG1L2C9J202 215 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 CLPXO76031 633 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 FSTL3O95633 263 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 APRTP07741 180 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 FAM58BPP0C7Q3 252 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 CD40P25942 277 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 EVI2BP34910 448 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 MASP1P48740 699 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 GPS1Q13098 491 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 DHX34Q14147 1143 aaKnown RBP5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 PDK4Q16654 411 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 AP5B1Q2VPB7 878 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 SLC9B1Q4ZJI4 515 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 PDSS1Q5T2R2 415 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 MED27Q6P2C8 311 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 NPSR1Q6W5P4 371 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 MUC15Q8N387 334 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 METTL4Q8N3J2 472 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 ZNF418Q8TF45 676 aaPredicted RBP5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 TMEM45BQ96B21 275 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 F2RL3Q96RI0 385 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 MMP27Q9H306 513 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 FBXO6Q9NRD1 293 aaPredicted RBP5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 PIH1D1Q9NWS0 290 aaKnown RBP5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 TMCO1Q9UM00 188 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 PCDHB10Q9UN67 800 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 SSX4O60224 188 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 TMPRSS11DO60235 418 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 YES1P07947 543 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 HK1P19367 917 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 TNNI3P19429 210 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 CSNK2A2P19784 350 aaPredicted RBP5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 FKBP2P26885 142 aaKnown RBP5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 EIF1P41567 113 aaKnown RBP5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 MMP16P51512 607 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 TPM4P67936 248 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 DEFA6Q01524 100 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 PON3Q15166 354 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 PLPPR5Q32ZL2 321 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 CPTPQ5TA50 214 aa5.24□□□□□ -1.57
CDC42SE2-201ENST00000360515 MFSD12Q6NUT3 480 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms