RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 TCRBV7S3A2A0A539 114 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 XKR5Q6UX68 686 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 PREBQ9HCU5 417 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 ASB4Q9Y574 426 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 TMEM233B4DJY2 109 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 YKT6O15498 198 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 SSX5O60225 188 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 TSPAN15O95858 294 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 HMGCLP35914 325 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 RRADP55042 308 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 LRFN4Q6PJG9 635 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 LCTLQ6UWM7 567 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 THAP3Q8WTV1 239 aaPredicted RBP9.18□□□□□ -0.94
CUX1-203ENST00000360264 SMG9Q9H0W8 520 aaKnown RBP9.18□□□□□ -0.94
CUX1-203ENST00000360264 HTR3BO95264 441 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 SPINT3P49223 89 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 NUDT6P53370 316 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 CCDC58Q4VC31 144 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 NANPQ8TBE9 248 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 RNASET2O00584 256 aaKnown RBP9.18□□□□□ -0.94
CUX1-203ENST00000360264 MAS1P04201 325 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 EIF4EP06730 217 aaKnown RBP9.18□□□□□ -0.94
CUX1-203ENST00000360264 ZNF888P0CJ79 500 aaPredicted RBP9.18□□□□□ -0.94
CUX1-203ENST00000360264 CD46P15529 392 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 AGTR2P50052 363 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 TAP2Q03519 686 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 SLC14A2Q15849 920 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 FIGLAQ6QHK4 219 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 OR51G2Q8NGK0 314 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 IMP4Q96G21 291 aaKnown RBP9.18□□□□□ -0.94
CUX1-203ENST00000360264 MRGPRX2Q96LB1 330 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 CACNG6Q9BXT2 260 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 SLC22A7Q9Y694 548 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 SMAD9O15198 467 aaKnown RBP9.18□□□□□ -0.94
CUX1-203ENST00000360264 IQCF3P0C7M6 154 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 MRPL21Q7Z2W9 205 aaKnown RBP9.18□□□□□ -0.94
CUX1-203ENST00000360264 OR52E2Q8NGJ4 325 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 SERINC2Q96SA4 455 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 MED1Q15648 1581 aaPredicted RBP9.18□□□□□ -0.94
CUX1-203ENST00000360264 ZNF623O75123 536 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 ZNF780AO75290 641 aaPredicted RBP9.18□□□□□ -0.94
CUX1-203ENST00000360264 IL32P24001 234 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 NXT1Q9UKK6 140 aaKnown RBP9.18□□□□□ -0.94
CUX1-203ENST00000360264 CPNE6O95741 557 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 SEMA4FO95754 770 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 ALDH3B1P43353 468 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 MAP2K4P45985 399 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 TRA2BP62995 288 aaKnown RBP9.18□□□□□ -0.94
CUX1-203ENST00000360264 KRBOX4Q5JUW0 171 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 GTPBP8Q8N3Z3 284 aaPredicted RBP9.18□□□□□ -0.94
CUX1-203ENST00000360264 GDPD1Q8N9F7 314 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 OR6T1Q8NGN1 323 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 C16orf78Q8WTQ4 265 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 SGIP1Q9BQI5 828 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 RNF225M0QZC1 329 aaPredicted RBP9.18□□□□□ -0.94
CUX1-203ENST00000360264 PKLRP30613 574 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 STEAP2Q8NFT2 490 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 CREB3L4Q8TEY5 395 aa9.18□□□□□ -0.94
CUX1-203ENST00000360264 ADAP00813 363 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 GALNT1Q10472 559 aaPredicted RBP9.17□□□□□ -0.94
CUX1-203ENST00000360264 SLX4IPQ5VYV7 408 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 BRICD5Q6PL45 260 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 Q6ZSR6 202 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 SYT14Q8NB59 555 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 LGALS12Q96DT0 336 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 RBCK1Q9BYM8 510 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 GRPRP30550 384 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 CPOXP36551 454 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 OR1E2P47887 323 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 HBG1P69891 147 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 HBG2P69892 147 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 SKA3Q8IX90 412 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 OR9I1Q8NGQ6 314 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 GPR148Q8TDV2 347 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 ZNF578Q96N58 590 aaPredicted RBP9.17□□□□□ -0.94
CUX1-203ENST00000360264 FAM118AQ9NWS6 357 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 RHCGQ9UBD6 479 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 F5H5K5 113 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 GGT1P19440 569 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 CCDC116Q8IYX3 515 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 PXYLP1Q8TE99 480 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 NME7Q9Y5B8 376 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 KIR2DS5A0A0G2JLQ3 304 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 A0A0G2JNG1 304 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 ARGFXA6NJG6 315 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 KIR2DS3K7RE56 304 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 SRPXP78539 464 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 MEF2DQ14814 521 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 KIR2DS5Q14953 304 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 GRIN2CQ14957 1233 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 UGT8Q16880 541 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 EEF1A1P5Q5VTE0 462 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 METTL11BQ5VVY1 283 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 BOLLQ8N9W6 283 aaKnown RBP9.17□□□□□ -0.94
CUX1-203ENST00000360264 SLC17A9Q9BYT1 436 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 FANCGO15287 622 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 AMY2AP04746 511 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 MSL3P1P0C860 447 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 ZNF616Q08AN1 781 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 SPHARQ15513 63 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms