RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 ALPK2Q86TB3 2170 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 TRBV4-1A0A0J9YWV2 114 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 CPED1A4D0V7 1026 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 H3BNH8 94 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 TNFRSF11BO00300 401 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 CYR61O00622 381 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 TOR1BO14657 336 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 CHST10O43529 356 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 FOXS1O43638 330 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 GATCO43716 136 aaKnown RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 GALR3O60755 368 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 SULT1C4O75897 302 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 MFN2O95140 757 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 TNFAIP8O95379 198 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 EPPINO95925 133 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 IFNA16P05015 189 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 CFIP05156 583 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 TFAP2AP05549 437 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 FHP07954 510 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 GIMD1P0DJR0 217 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 ITGA2P17301 1181 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 CD247P20963 164 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 ALAS2P22557 587 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 FMO3P31513 532 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 DNAJA1P31689 397 aaKnown RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 CSF2RBP32927 897 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 OR1D4P47884 311 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 FASLGP48023 281 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 GDI2P50395 445 aaKnown RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 PDX1P52945 283 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 ITGA1P56199 1179 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 TRA2BP62995 288 aaKnown RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 PIN1Q13526 163 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 RAPSNQ13702 412 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 SHBQ15464 509 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 NADK2Q4G0N4 442 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 KCTD21Q4G0X4 260 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 C14orf28Q4W4Y0 310 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 CRB2Q5IJ48 1285 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 AGAP7PQ5VUJ5 663 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 MLIPQ5VWP3 458 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 TMEM236Q5W0B7 351 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 LAIR1Q6GTX8 287 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 SHQ1Q6PI26 577 aaKnown RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 SHISA6Q6ZSJ9 500 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 VRK2Q86Y07 508 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 ARMC8Q8IUR7 673 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 LINC00518Q8N0U6 118 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 CAMKK1Q8N5S9 505 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 PACRGLQ8N7B6 248 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 ZNF565Q8N9K5 539 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 RCBTB1Q8NDN9 531 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 MMABQ96EY8 250 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 SLC35A4Q96G79 324 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 PLEKHA8Q96JA3 519 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 FEVQ99581 238 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 RBM4BQ9BQ04 359 aaKnown RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 MESP1Q9BRJ9 268 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 RBM4Q9BWF3 364 aaKnown RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 TWSG1Q9GZX9 223 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 ING2Q9H160 280 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 A4GALTQ9NPC4 353 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 PNPLA3Q9NST1 481 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 GIMAP4Q9NUV9 329 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 LYARQ9NX58 379 aaKnown RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 EHD3Q9NZN3 535 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 NDOR1Q9UHB4 597 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 LYVE1Q9Y5Y7 322 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 LAMA5O15230 3695 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 A6NJY4 79 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 A8MUA0 341 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 PTGES3LE9PB15 166 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 H0YJX3 145 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 HYAL3O43820 417 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-202ENST00000359366 XPNPEP2O43895 674 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 MAN1A2O60476 641 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 TBX19O60806 448 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 SNAPINO95295 136 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 IGHA1P01876 353 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 CPMP14384 443 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 HPGDP15428 266 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 EEF1B2P24534 225 aaKnown RBP4.74□□□□□ -1.65
ATXN3-202ENST00000359366 PGDP52209 483 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 RAB14P61106 215 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 RHAGQ02094 409 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 CD47Q08722 323 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 RBBP4Q09028 425 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 DBPQ10586 325 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-202ENST00000359366 SLC13A2Q13183 592 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 SEC23BQ15437 767 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 DUSP5Q16690 384 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 FGD3Q5JSP0 725 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 ATAD3BQ5T9A4 648 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 C1orf189Q5VU69 101 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 LYSMD4Q5XG99 296 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 GTF2IRD2BQ6EKJ0 949 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 LAIR2Q6ISS4 152 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 FIGNL1Q6PIW4 674 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 GTF2IRD2Q86UP8 949 aa4.74□□□□□ -1.65
ATXN3-202ENST00000359366 PARP8Q8N3A8 854 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms