RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 MRPL21Q7Z2W9 205 aaKnown RBP17.39■□□□□ 0.37
SHANK1-202ENST00000359082 SDR9C7Q8NEX9 313 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 DEDD2Q8WXF8 326 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 L3HYPDHQ96EM0 354 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 ALOXE3Q9BYJ1 711 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 PLEKHJ1Q9NW61 149 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 SCAPQ12770 1279 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 FUBP1Q96AE4 644 aaKnown RBP17.39■□□□□ 0.37
SHANK1-202ENST00000359082 TAS2R8Q9NYW2 309 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 VDAC3Q9Y277 283 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 DNAJC15Q9Y5T4 150 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 A0A0U1RQS6 177 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 ZNF254O75437 659 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 MC3RP41968 323 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 MEX3BQ6ZN04 569 aaKnown RBP17.38■□□□□ 0.37
SHANK1-202ENST00000359082 TP53INP2Q8IXH6 220 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 AK6Q9Y3D8 172 aaKnown RBP17.38■□□□□ 0.37
SHANK1-202ENST00000359082 IQCF3P0C7M6 154 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 MYF6P23409 242 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 EPHA4P54764 986 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 RTP2Q5QGT7 225 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 OR4K5Q8NGD3 323 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 ZNF778Q96MU6 729 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 CXXC1Q9P0U4 656 aaPredicted RBP17.38■□□□□ 0.37
SHANK1-202ENST00000359082 PIAS3Q9Y6X2 628 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 DCDC2BA2VCK2 349 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 F8W036 122 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 BLOC1S1P78537 153 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 OR7A5Q15622 319 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 RBM12BQ8IXT5 1001 aaKnown RBP17.38■□□□□ 0.37
SHANK1-202ENST00000359082 SLC2A12Q8TD20 617 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 ARL5BQ96KC2 179 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 BIRC8Q96P09 236 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 HHATLQ9HCP6 504 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 RLIMQ9NVW2 624 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 HSPE1-MOB4S4R3N1 261 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 C17orf105B2RV13 164 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 MPIG6BO95866 241 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 DCNP07585 359 aaKnown RBP17.38■□□□□ 0.37
SHANK1-202ENST00000359082 RAB3AP20336 220 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 LIN37Q96GY3 246 aaPredicted RBP17.38■□□□□ 0.37
SHANK1-202ENST00000359082 MS4A4EQ96PG1 132 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 SORBS1Q9BX66 1292 aaKnown RBP17.38■□□□□ 0.37
SHANK1-202ENST00000359082 MMP28Q9H239 520 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 IL23AQ9NPF7 189 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 SERTAD4Q9NUC0 356 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 SC5DO75845 299 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 TMEM25Q86YD3 366 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 SLC15A4Q8N697 577 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 CNOT9Q92600 299 aaKnown RBP17.38■□□□□ 0.37
SHANK1-202ENST00000359082 TMEM45AQ9NWC5 275 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 COQ3Q9NZJ6 369 aa17.38■□□□□ 0.37
SHANK1-202ENST00000359082 PENKP01210 267 aaPredicted RBP17.37■□□□□ 0.37
SHANK1-202ENST00000359082 PIP5KL1Q5T9C9 394 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 FRZBQ92765 325 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 OR14A2Q96R54 314 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 ZFYVE21Q9BQ24 234 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 ZNF696Q9H7X3 374 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 ACOT13Q9NPJ3 140 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 ANKMY1Q9P2S6 941 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 B3GNT3Q9Y2A9 372 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 CICQ96RK0 1608 aaPredicted RBP17.37■□□□□ 0.37
SHANK1-202ENST00000359082 ARPC4-TTLL3A0A0A6YYG9 625 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 GCH1P30793 250 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 SCGB2A2Q13296 93 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 STK11Q15831 433 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 SHISA6Q6ZSJ9 500 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 CYB561A3Q8NBI2 242 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 SYNPRQ8TBG9 265 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 RETREG1Q9H6L5 497 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 TMEM100Q9NV29 134 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 KLHL13Q9P2N7 655 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 LOC102723532A0A0G2JNH3 316 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 FOLR3P41439 243 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 HTR6P50406 440 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 MELKQ14680 651 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 PTPRRQ15256 657 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 DEFB133Q30KQ1 61 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 GTDC1Q4AE62 458 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 MS4A15Q8N5U1 240 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 NPWQ8N729 165 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 SENP5Q96HI0 755 aaPredicted RBP17.37■□□□□ 0.37
SHANK1-202ENST00000359082 MAP3K3Q99759 626 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 VSX1Q9NZR4 365 aaPredicted RBP17.37■□□□□ 0.37
SHANK1-202ENST00000359082 SORBS2O94875 1100 aaKnown RBP17.37■□□□□ 0.37
SHANK1-202ENST00000359082 P2RY14Q15391 338 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 MFSD6LQ8IWD5 586 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 OR5D16Q8NGK9 328 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 C8orf33Q9H7E9 229 aaPredicted RBP17.37■□□□□ 0.37
SHANK1-202ENST00000359082 USP36Q9P275 1121 aaKnown RBP17.37■□□□□ 0.37
SHANK1-202ENST00000359082 ANKRD33BA6NCL7 494 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 TFP02787 698 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 ZNF28P17035 718 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 PRPS1P60891 318 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 SLC22A10Q63ZE4 541 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 TRUB1Q8WWH5 349 aaKnown RBP17.37■□□□□ 0.37
SHANK1-202ENST00000359082 TEX10Q9NXF1 929 aaPredicted RBP17.37■□□□□ 0.37
SHANK1-202ENST00000359082 RABL2AQ9UBK7 228 aaPredicted RBP17.37■□□□□ 0.37
SHANK1-202ENST00000359082 RABL2BQ9UNT1 228 aa17.37■□□□□ 0.37
SHANK1-202ENST00000359082 PABPC4LP0CB38 370 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms