RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 GATBO75879 557 aaKnown RBP6.17□□□□□ -1.42
CSDE1-203ENST00000358528 OR7A10O76100 309 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 LATS1O95835 1130 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 C1QBP02746 253 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 HMGN1P05114 100 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 NDUFV2P19404 249 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 NT5EP21589 574 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 OR4C11Q6IEV9 310 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 FIGNL1Q6PIW4 674 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 FAM83HQ6ZRV2 1179 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-203ENST00000358528 GRASPQ7Z6J2 395 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-203ENST00000358528 LRRTM4Q86VH4 590 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 LAS2Q8IYD9 372 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 FBXO15Q8NCQ5 510 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-203ENST00000358528 OR8K3Q8NH51 312 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 SUN3Q8TAQ9 357 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 METTL2AQ96IZ6 378 aaKnown RBP6.17□□□□□ -1.42
CSDE1-203ENST00000358528 PRRC1Q96M27 445 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 SLC6A18Q96N87 628 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 CD180Q99467 661 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 RBCK1Q9BYM8 510 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 CHST8Q9H2A9 424 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 OR51J1Q9H342 316 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 IL21Q9HBE4 155 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 SLC25A19Q9HC21 320 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 SEMA4GQ9NTN9 838 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 USP36Q9P275 1121 aaKnown RBP6.17□□□□□ -1.42
CSDE1-203ENST00000358528 ZNF69Q9UC07 566 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 CACNG2Q9Y698 323 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 KCNE3Q9Y6H6 103 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 A0A1B0GVT2 93 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 RGS9O75916 674 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-203ENST00000358528 CTSLP07711 333 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 CHRM4P08173 479 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 H2AFB2P0C5Z0 115 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 PITPNBP48739 271 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 DEFB103AP81534 67 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 TCTN1Q2MV58 587 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 MINDY4Q4G0A6 757 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 TP53I3Q53FA7 332 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 YIF1BQ5BJH7 314 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 C3orf38Q5JPI3 329 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 ENTPD8Q5MY95 495 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 ZC3H14Q6PJT7 736 aaKnown RBP6.17□□□□□ -1.42
CSDE1-203ENST00000358528 RNF165Q6ZSG1 346 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 KLHDC8AQ8IYD2 350 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 TCEAL8Q8IYN2 117 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 RDH10Q8IZV5 341 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 FAM26EQ8N5C1 309 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 VN1R2Q8NFZ6 395 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 OR13C5Q8NGS8 318 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 COQ8AQ8NI60 647 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 FANK1Q8TC84 345 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 TMEM255BQ8WV15 326 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 GCDHQ92947 438 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-203ENST00000358528 DCLRE1CQ96SD1 692 aaKnown RBP6.17□□□□□ -1.42
CSDE1-203ENST00000358528 TAPBPLQ9BX59 468 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 FOLH1BQ9HBA9 442 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 EVA1BQ9NVM1 165 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 DEC1Q9P2X7 70 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 A4GNTQ9UNA3 340 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 CHST2Q9Y4C5 530 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 SESN1Q9Y6P5 492 aa6.17□□□□□ -1.42
CSDE1-203ENST00000358528 PATJQ8NI35 1801 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 A0A0A6YYJ9 748 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 FAM171A2A8MVW0 826 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 TMEM229AB2RXF0 380 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 M0R233 179 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 SLC9A3R1O14745 358 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-203ENST00000358528 SLC31A1O15431 190 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 FCMRO60667 390 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 SLC19A2O60779 497 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 KDM4BO94953 1096 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 IFNA7P01567 189 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 PSMA3P25788 255 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 SOX2P48431 317 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 EVX1P49640 407 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 PCBP3P57721 371 aaKnown RBP6.16□□□□□ -1.42
CSDE1-203ENST00000358528 SIM1P81133 766 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-203ENST00000358528 OC90Q02509 493 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-203ENST00000358528 SGCGQ13326 291 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 OCLNQ16625 522 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 HES5Q5TA89 166 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 C12orf73Q69YU5 71 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 FRRS1Q6ZNA5 592 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 Q6ZNB5 142 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 QSOX2Q6ZRP7 698 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 IKBIPQ70UQ0 350 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 DGLUCYQ7Z3D6 616 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 ADGRF3Q8IZF5 1079 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 NATD1Q8N6N6 113 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 OR4E2Q8NGC2 313 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 ORAI1Q96D31 301 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 OTUB2Q96DC9 234 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 SLC41A3Q96GZ6 507 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 PPP1R16AQ96I34 528 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 TMEM43Q9BTV4 400 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 TTYH1Q9H313 450 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-203ENST00000358528 KLHL31Q9H511 634 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 ACOXLQ9NUZ1 547 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms