RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 TSPAN6O43657 245 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 LDB2O43679 373 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 OR1I1O60431 355 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 PRMT3O60678 531 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 SOX30O94993 753 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 RASGRP1O95267 797 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 TRBC1P01850 177 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 FABP3P05413 133 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 SPP1P10451 314 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 CKMT1AP12532 417 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 LCN1P31025 176 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 SDC2P34741 201 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 RPL3P39023 403 aaKnown RBP3.75□□□□□ -1.81
CNGA1-201ENST00000358519 NSG1P42857 185 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 HSPA7P48741 367 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 EVX1P49640 407 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 STARP49675 285 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 CDKN2DP55273 166 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 CAV3P56539 151 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 ST8SIA6P61647 398 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 MRPS21P82921 87 aaKnown RBP3.75□□□□□ -1.81
CNGA1-201ENST00000358519 SHC2P98077 582 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 TRAM2Q15035 370 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 PCBP2Q15366 365 aaKnown RBP eCLIP3.75□□□□□ -1.81
CNGA1-201ENST00000358519 SPHARQ15513 63 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 OR4D1Q15615 310 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 EXOC3L2Q2M3D2 409 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 SIRPB2Q5JXA9 342 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 RNF219Q5W0B1 726 aaPredicted RBP3.75□□□□□ -1.81
CNGA1-201ENST00000358519 PLAG1Q6DJT9 500 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 C22orf42Q6IC83 251 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 ALKBH2Q6NS38 261 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 KIAA1161Q6NSJ0 714 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 FAM180BQ6P0A1 224 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 ZNF549Q6P9A3 640 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 TMEM88Q6PEY1 159 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 FAM198BQ6UWH4 519 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 ALKAL2Q6UX46 152 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 RBMS3Q6XE24 437 aaKnown RBP3.75□□□□□ -1.81
CNGA1-201ENST00000358519 Q6ZSR9 355 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 USP30Q70CQ3 517 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 KRT74Q7RTS7 529 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 PIM3Q86V86 326 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 MSRB3Q8IXL7 192 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 DMRTC2Q8IXT2 367 aaPredicted RBP3.75□□□□□ -1.81
CNGA1-201ENST00000358519 LIX1Q8N485 282 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 EIF4E3Q8N5X7 224 aaKnown RBP3.75□□□□□ -1.81
CNGA1-201ENST00000358519 GPR156Q8NFN8 814 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 EDEM1Q92611 657 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 SMARCD2Q92925 531 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 TMEM203Q969S6 136 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 CXorf40BQ96DE9 158 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 CRB3Q9BUF7 120 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 PDCD10Q9BUL8 212 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 FICDQ9BVA6 458 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 BTBD1Q9H0C5 482 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 PCBD2Q9H0N5 130 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 REEP1Q9H902 201 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 UCK1Q9HA47 277 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 TMEM30AQ9NV96 361 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 C1orf109Q9NX04 203 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 ZNF225Q9UK10 706 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 FZD4Q9ULV1 537 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 SAMD4AQ9UPU9 718 aaKnown RBP3.75□□□□□ -1.81
CNGA1-201ENST00000358519 CLCA2Q9UQC9 943 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 NUP205Q92621 2012 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 USP24Q9UPU5 2620 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 PLXNB3Q9ULL4 1909 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 C5orf42Q9H799 3197 aa3.75□□□□□ -1.81
CNGA1-201ENST00000358519 A0A1B0GTQ1 180 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 G3V3Q6 166 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 FAM72CH0Y354 149 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 SCAMP1O15126 338 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 CASC3O15234 703 aaKnown RBP3.74□□□□□ -1.81
CNGA1-201ENST00000358519 B4GALT3O60512 393 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 CCNDBP1O95273 360 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 CHRM5P08912 532 aaPredicted RBP3.74□□□□□ -1.81
CNGA1-201ENST00000358519 HIST1H2AGP0C0S8 130 aaPredicted RBP3.74□□□□□ -1.81
CNGA1-201ENST00000358519 UROSP10746 265 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 PRF1P14222 555 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 CD1DP15813 335 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 ENGP17813 658 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 HIST1H2ADP20671 130 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 GABRR2P28476 465 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 AKT1P31749 480 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 GPX4P36969 197 aaPredicted RBP3.74□□□□□ -1.81
CNGA1-201ENST00000358519 RFC3P40938 356 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 KCNJ5P48544 419 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 P2RY4P51582 365 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 MAZP56270 477 aaKnown RBP3.74□□□□□ -1.81
CNGA1-201ENST00000358519 CTBP2P56545 445 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 RHOAP61586 193 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 TSPAN5P62079 268 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 PPP3R1P63098 170 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 LGALS3BPQ08380 585 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 ARHGAP19Q14CB8 494 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 KIAA0040Q15053 153 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 RBMS2Q15434 407 aaKnown RBP3.74□□□□□ -1.81
CNGA1-201ENST00000358519 CHRNA6Q15825 494 aa3.74□□□□□ -1.81
CNGA1-201ENST00000358519 C21orf62-AS1Q17RA5 79 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms