RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 FAM109AQ8N4B1 249 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 SRFBP1Q8NEF9 429 aaKnown RBP16.57■□□□□ 0.24
RTN4-204ENST00000357732 RFT1Q96AA3 541 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 DCLRE1CQ96SD1 692 aaKnown RBP16.57■□□□□ 0.24
RTN4-204ENST00000357732 SLC28A3Q9HAS3 691 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 CTPS2Q9NRF8 586 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 B3GNT2Q9NY97 397 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 IRAK3Q9Y616 596 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 LCMT2O60294 686 aaKnown RBP16.56■□□□□ 0.24
RTN4-204ENST00000357732 DHFRP00374 187 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 ADH5P11766 374 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 ELK1P19419 428 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 PSMB5P28074 263 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 MNX1P50219 401 aaPredicted RBP16.56■□□□□ 0.24
RTN4-204ENST00000357732 ERVFC1P60507 584 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 IKZF1Q13422 519 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 ADCK2Q7Z695 626 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 ACBD7Q8N6N7 88 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 AMER3Q8N944 861 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 SLC37A3Q8NCC5 494 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 WDR70Q9NW82 654 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 BABAM2Q9NXR7 383 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 PRKAB1Q9Y478 270 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 LOC102723532A0A0G2JNH3 316 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 C7orf66A4D0T2 115 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 DUXAA6NLW8 204 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 CPSF4LA6NMK7 179 aaKnown RBP16.56■□□□□ 0.24
RTN4-204ENST00000357732 LINC00271P0C7V0 271 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 PAICSP22234 425 aaKnown RBP16.56■□□□□ 0.24
RTN4-204ENST00000357732 AHRP35869 848 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 OR3A3P47888 321 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 CSTF1Q05048 431 aaKnown RBP16.56■□□□□ 0.24
RTN4-204ENST00000357732 ZNF791Q3KP31 576 aaPredicted RBP16.56■□□□□ 0.24
RTN4-204ENST00000357732 PLA1AQ53H76 456 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 LAMTOR1Q6IAA8 161 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 SLC48A1Q6P1K1 146 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 SMARCD3Q6STE5 483 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 PLEKHM3Q6ZWE6 761 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 OAFQ86UD1 273 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 BRIX1Q8TDN6 353 aaKnown RBP16.56■□□□□ 0.24
RTN4-204ENST00000357732 UCN3Q969E3 161 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 CNRIP1Q96F85 164 aaPredicted RBP16.56■□□□□ 0.24
RTN4-204ENST00000357732 AHCYL2Q96HN2 611 aaKnown RBP16.56■□□□□ 0.24
RTN4-204ENST00000357732 MKRN2Q9H000 416 aaKnown RBP16.56■□□□□ 0.24
RTN4-204ENST00000357732 TRIM36Q9NQ86 728 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 PTGFRNQ9P2B2 879 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 SLC23A2Q9UGH3 650 aa16.56■□□□□ 0.24
RTN4-204ENST00000357732 PCYT1BQ9Y5K3 369 aaPredicted RBP16.56■□□□□ 0.24
RTN4-204ENST00000357732 NCR1O76036 304 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 ADH1CP00326 375 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 ACSL1P33121 698 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 CTBP2P56545 445 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 MESP2Q0VG99 397 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 MAP4K2Q12851 820 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 FZD5Q13467 585 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 PLPP4Q5VZY2 271 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 CDH24Q86UP0 819 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 C12orf40Q86WS4 652 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 KLBQ86Z14 1044 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 LINC01555Q8NAE3 123 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 SARGQ9BW04 601 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 PRR14Q9BWN1 585 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 HDHD2Q9H0R4 259 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 RANBP3Q9H6Z4 567 aaPredicted RBP16.55■□□□□ 0.24
RTN4-204ENST00000357732 ING4Q9UNL4 249 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 NCKAP1Q9Y2A7 1128 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 CD8B2A6NJW9 211 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 ERAL1O75616 437 aaKnown RBP16.55■□□□□ 0.24
RTN4-204ENST00000357732 CD8BP10966 210 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 NPR2P20594 1047 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 PITPNBP48739 271 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 RAB28P51157 221 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 RGS8P57771 180 aaPredicted RBP16.55■□□□□ 0.24
RTN4-204ENST00000357732 TAS2R43P59537 309 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 GPR176Q14439 515 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 TCEAL5Q5H9L2 206 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 ABHD17CQ6PCB6 329 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 CXXC5Q7LFL8 322 aaKnown RBP16.55■□□□□ 0.24
RTN4-204ENST00000357732 GLCCI1Q86VQ1 547 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 GPALPP1Q8IXQ4 340 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 ING5Q8WYH8 240 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 MS4A6EQ96DS6 147 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 YIPF4Q9BSR8 244 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 WACQ9BTA9 647 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 ACTRT3Q9BYD9 372 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 CACYBPQ9HB71 228 aaKnown RBP16.55■□□□□ 0.24
RTN4-204ENST00000357732 EMC7Q9NPA0 242 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 PRDM7Q9NQW5 492 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 COPZ2Q9P299 210 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 CES1P1Q9UKY3 287 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 HSPB11Q9Y547 144 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 RNF215Q9Y6U7 377 aa16.55■□□□□ 0.24
RTN4-204ENST00000357732 A0A1W2PR48 441 aa16.54■□□□□ 0.24
RTN4-204ENST00000357732 NOS1APO75052 506 aaPredicted RBP16.54■□□□□ 0.24
RTN4-204ENST00000357732 RFPL3O75679 317 aa16.54■□□□□ 0.24
RTN4-204ENST00000357732 CRYZL1O95825 349 aa16.54■□□□□ 0.24
RTN4-204ENST00000357732 ALPPL2P10696 532 aa16.54■□□□□ 0.24
RTN4-204ENST00000357732 CCL5P13501 91 aa16.54■□□□□ 0.24
RTN4-204ENST00000357732 F3P13726 295 aa16.54■□□□□ 0.24
RTN4-204ENST00000357732 CDK3Q00526 305 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms