RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 TMEM68Q96MH6 324 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 C11orf49Q9H6J7 331 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 IL26Q9NPH9 171 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 CD300AQ9UGN4 299 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 SLC7A7Q9UM01 511 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 VSTM2BA6NLU5 285 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 THBS2P35442 1172 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 DLSTP36957 453 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 TP53I3Q53FA7 332 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 ATAD3CQ5T2N8 411 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 TTLL10Q6ZVT0 673 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 BEST4Q8NFU0 473 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 GPR148Q8TDV2 347 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 PAAF1Q9BRP4 392 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 MKRN2Q9H000 416 aaKnown RBP14.04□□□□□ -0.16
CHD4-201ENST00000357008 CSNK1G3Q9Y6M4 447 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 MYH7BA7E2Y1 1941 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 IFNA4P05014 189 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 WDR5P61964 334 aaKnown RBP14.04□□□□□ -0.16
CHD4-201ENST00000357008 CIDECQ96AQ7 238 aaPredicted RBP14.04□□□□□ -0.16
CHD4-201ENST00000357008 DEFB126Q9BYW3 111 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 RNF215Q9Y6U7 377 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 IRS2Q9Y4H2 1338 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 IL1AP01583 271 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 IFNGR1P15260 489 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 DDCP20711 480 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 GRM2Q14416 872 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 C3P1Q6ZMU1 363 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 TREX1Q9NSU2 369 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 PARP4Q9UKK3 1724 aaKnown RBP14.04□□□□□ -0.16
CHD4-201ENST00000357008 SULT1C2O00338 296 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 HOXB9P17482 250 aaPredicted RBP14.04□□□□□ -0.16
CHD4-201ENST00000357008 PRDX3P30048 256 aaKnown RBP14.04□□□□□ -0.16
CHD4-201ENST00000357008 AKR1C8PQ5T2L2 129 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 CBLL1Q75N03 491 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 CRYGNQ8WXF5 182 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 C3orf30Q96M34 536 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 NAA11Q9BSU3 229 aaPredicted RBP14.04□□□□□ -0.16
CHD4-201ENST00000357008 CLDND1Q9NY35 253 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 A0A1W2PQU0 124 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 IGLON5A6NGN9 336 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 RNGTTO60942 597 aaKnown RBP14.04□□□□□ -0.16
CHD4-201ENST00000357008 IFNA10P01566 189 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 AKAIN1P0CW23 69 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 PRKACAP17612 351 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 CNTN4Q8IWV2 1026 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 ARFGAP1Q8N6T3 406 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 FIBINQ8TAL6 211 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 ZNF587Q96SQ5 575 aaPredicted RBP14.04□□□□□ -0.16
CHD4-201ENST00000357008 BACE2Q9Y5Z0 518 aa14.04□□□□□ -0.16
CHD4-201ENST00000357008 FBLP22087 321 aaKnown RBP14.03□□□□□ -0.16
CHD4-201ENST00000357008 CSNK2A1P68400 391 aaPredicted RBP14.03□□□□□ -0.16
CHD4-201ENST00000357008 PGM2L1Q6PCE3 622 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 CSNK2A3Q8NEV1 391 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 OR51L1Q8NGJ5 315 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 DOK4Q8TEW6 326 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 TEPSINQ96N21 525 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 OR1F2PQ96R84 312 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 FAM86C1Q9NVL1 165 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 DCNP07585 359 aaKnown RBP14.03□□□□□ -0.16
CHD4-201ENST00000357008 MSL3P1P0C860 447 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 MLLT11Q13015 90 aaPredicted RBP14.03□□□□□ -0.16
CHD4-201ENST00000357008 NKPD1Q17RQ9 610 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 BCL7AQ4VC05 210 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 SFXN5Q8TD22 340 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 ZMYND19Q96E35 227 aaPredicted RBP14.03□□□□□ -0.16
CHD4-201ENST00000357008 PRRC1Q96M27 445 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 IL37Q9NZH6 218 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 SELENOVP59797 346 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 RSU1Q15404 277 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 ACSM3Q53FZ2 586 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 FRMPD2BQ6IN97 320 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 CDRT4Q8N9R6 151 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 CYB561A3Q8NBI2 242 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 C5AR2Q9P296 337 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 MGAT3Q09327 533 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 CCDC71LQ8N9Z2 235 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 TMEM185AQ8NFB2 350 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 ADAMTS14Q8WXS8 1223 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 TRIB2Q92519 343 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 RRNAD1Q96FB5 475 aaKnown RBP14.03□□□□□ -0.16
CHD4-201ENST00000357008 ACPTQ9BZG2 426 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 PPA2Q9H2U2 334 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 WDR6Q9NNW5 1121 aaKnown RBP14.03□□□□□ -0.16
CHD4-201ENST00000357008 DMRT3Q9NQL9 472 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 MYH11P35749 1972 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 A0A1B0GV50 99 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 ANTXRLA6NF34 631 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 PTGESO14684 152 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 NR0B1P51843 470 aaKnown RBP14.03□□□□□ -0.16
CHD4-201ENST00000357008 LRRC28Q86X40 367 aaPredicted RBP14.03□□□□□ -0.16
CHD4-201ENST00000357008 GLYATL2Q8WU03 294 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 MUL1Q969V5 352 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 SAP130Q9H0E3 1048 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 TMPRSS11EQ9UL52 423 aa14.03□□□□□ -0.16
CHD4-201ENST00000357008 ZNF736B4DX44 427 aaPredicted RBP14.02□□□□□ -0.16
CHD4-201ENST00000357008 SYT7O43581 403 aa14.02□□□□□ -0.16
CHD4-201ENST00000357008 HPGDSO60760 199 aa14.02□□□□□ -0.16
CHD4-201ENST00000357008 C21orf33P30042 268 aaPredicted RBP14.02□□□□□ -0.16
CHD4-201ENST00000357008 DLX5P56178 289 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms