RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 SOX30O94993 753 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 ANP32DO95626 131 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 KRT75O95678 551 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 FSHBP01225 129 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 RAB40ALP0C0E4 278 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 LAMP1P11279 417 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 PIM1P11309 404 aaPredicted RBP6.47□□□□□ -1.37
VPS13A-201ENST00000355766 FOLR1P15328 257 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 TYRP1P17643 537 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 SSR2P43308 183 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 HSPA13P48723 471 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 DGKQP52824 942 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 TAS2R50P59544 299 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 PHC1P78364 1004 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 MS4A2Q01362 244 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 ACY1Q03154 408 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 ATP1A4Q13733 1029 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 GK3PQ14409 553 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 HKDC1Q2TB90 917 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 RABL3Q5HYI8 236 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 ADNP2Q6IQ32 1131 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 LRRC74BQ6ZQY2 392 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 Q6ZS92 163 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 VN1R4Q7Z5H5 301 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 MSRB3Q8IXL7 192 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 KBTBD2Q8IY47 623 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 PQLC1Q8N2U9 271 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 PACRGLQ8N7B6 248 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 SLC16A11Q8NCK7 471 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 DNAJB14Q8TBM8 379 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 SFXN5Q8TD22 340 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 ITLN2Q8WWU7 325 aaPredicted RBP6.47□□□□□ -1.37
VPS13A-201ENST00000355766 OR5P2Q8WZ92 322 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 TM9SF4Q92544 642 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 MR1Q95460 341 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 ZDHHC12Q96GR4 267 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 SLC41A2Q96JW4 573 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 NSMCE2Q96MF7 247 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 PPM1MQ96MI6 270 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 ZNF583Q96ND8 569 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 SERINC2Q96SA4 455 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 SLC39A3Q9BRY0 314 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 TACO1Q9BSH4 297 aaKnown RBP6.47□□□□□ -1.37
VPS13A-201ENST00000355766 OSBPL10Q9BXB5 764 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 EBPLQ9BY08 206 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 TMEM38AQ9H6F2 299 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 CHST11Q9NPF2 352 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 HRASLS2Q9NWW9 162 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 SLC25A37Q9NYZ2 338 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 PACSIN3Q9UKS6 424 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 SPACA6W5XKT8 324 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 NAV3Q8IVL0 2385 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 SPG11Q96JI7 2443 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 SNRNP200O75643 2136 aaKnown RBP6.46□□□□□ -1.37
VPS13A-201ENST00000355766 GSAPA4D1B5 854 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 ERI3O43414 337 aaKnown RBP6.46□□□□□ -1.38
VPS13A-201ENST00000355766 SCRG1O75711 98 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 KLK1P06870 262 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 IL3P08700 152 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 FAM58BPP0C7Q3 252 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 SMIM10L1P0DMW3 83 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 MAGP20916 626 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 IL10P22301 178 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 UQCRC2P22695 453 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 ATP5A1P25705 553 aaKnown RBP6.46□□□□□ -1.38
VPS13A-201ENST00000355766 PPP2R1BP30154 601 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 SSTR2P30874 369 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 NTSP30990 170 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 PCGF2P35227 344 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 GZMMP51124 257 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 MEF2AQ02078 507 aaPredicted RBP6.46□□□□□ -1.38
VPS13A-201ENST00000355766 CAPRIN1Q14444 709 aaKnown RBP6.46□□□□□ -1.38
VPS13A-201ENST00000355766 KCNAB1Q14722 419 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 MYBPC3Q14896 1274 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 ZNF630Q2M218 657 aaPredicted RBP6.46□□□□□ -1.38
VPS13A-201ENST00000355766 PGS1Q32NB8 556 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 TCTE1Q5JU00 501 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 WLSQ5T9L3 541 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 INTS11Q5TA45 600 aaKnown RBP6.46□□□□□ -1.38
VPS13A-201ENST00000355766 NDUFAF5Q5TEU4 345 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 FAM69BQ5VUD6 431 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 YOD1Q5VVQ6 348 aaPredicted RBP6.46□□□□□ -1.38
VPS13A-201ENST00000355766 PRAMEF8Q5VWM4 474 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 PRAMEF7Q5VXH5 474 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 OR4F3Q6IEY1 312 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 OR52E8Q6IFG1 317 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 IRGCQ6NXR0 463 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 FIGLAQ6QHK4 219 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 FAM198BQ6UWH4 519 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 DCHS2Q6V1P9 2916 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 FAM92BQ6ZTR7 304 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 SPATA24Q86W54 205 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 MICU2Q8IYU8 434 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 ZADH2Q8N4Q0 377 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 ACOT4Q8N9L9 421 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 OR7A2PQ8NGA2 310 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 OR52N2Q8NGI0 321 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 CLHC1Q8NHS4 586 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 PHOSPHO1Q8TCT1 267 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 ZFP90Q8TF47 636 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms