RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 KLF4O43474 513 aa20.77■□□□□ 0.92
NKX2-1-201ENST00000354822 DLGAP3O95886 979 aa20.77■□□□□ 0.92
NKX2-1-201ENST00000354822 HMGN1P05114 100 aa20.77■□□□□ 0.92
NKX2-1-201ENST00000354822 ILF3Q12906 894 aaKnown RBP eCLIP20.77■□□□□ 0.92
NKX2-1-201ENST00000354822 GPR18Q14330 331 aa20.77■□□□□ 0.92
NKX2-1-201ENST00000354822 DUSP5Q16690 384 aa20.77■□□□□ 0.92
NKX2-1-201ENST00000354822 ZNF628Q5EBL2 1059 aa20.77■□□□□ 0.92
NKX2-1-201ENST00000354822 RANBP3LQ86VV4 465 aaPredicted RBP20.77■□□□□ 0.92
NKX2-1-201ENST00000354822 MEX3DQ86XN8 651 aaKnown RBP20.77■□□□□ 0.92
NKX2-1-201ENST00000354822 OR4N5Q8IXE1 308 aa20.77■□□□□ 0.92
NKX2-1-201ENST00000354822 OR10G6Q8NH81 332 aa20.77■□□□□ 0.92
NKX2-1-201ENST00000354822 WDFY2Q96P53 400 aa20.77■□□□□ 0.92
NKX2-1-201ENST00000354822 BARHL1Q9BZE3 327 aa20.77■□□□□ 0.92
NKX2-1-201ENST00000354822 PAIP2BQ9ULR5 123 aaKnown RBP20.77■□□□□ 0.92
NKX2-1-201ENST00000354822 GPR52Q9Y2T5 361 aa20.77■□□□□ 0.92
NKX2-1-201ENST00000354822 SLC35F4A4IF30 521 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 C2orf74A8MZ97 194 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 IFI6P09912 130 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 EIF2B2P49770 351 aaKnown RBP20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 MAP4K2Q12851 820 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 ALG11Q2TAA5 492 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 CLEC12AQ5QGZ9 265 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 ZNF836Q6ZNA1 936 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 NRMQ8IXM6 262 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 PMM1Q92871 262 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 SLC25A46Q96AG3 418 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 TRMT61AQ96FX7 289 aaKnown RBP20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 SATB2Q9UPW6 733 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 SCN3AQ9NY46 2000 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 SURF4O15260 269 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 RGS5O15539 181 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 ATP1B1P05026 303 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 DBIP07108 87 aaKnown RBP20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 GNSP15586 552 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 TPMTP51580 245 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 EEF1A1P68104 462 aaKnown RBP20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 HOXC5Q00444 222 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 ZNF619Q8N2I2 560 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 POGLUT1Q8NBL1 392 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 UFD1Q92890 307 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 MSLNLQ96KJ4 702 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 NECTIN4Q96NY8 510 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 MED18Q9BUE0 208 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 ZNF350Q9GZX5 532 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 CARD8Q9Y2G2 431 aa20.76■□□□□ 0.91
NKX2-1-201ENST00000354822 SLC30A4O14863 429 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 PLOD3O60568 738 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 STX11O75558 287 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 THY1P04216 161 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 LTBRP36941 435 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 CDH11P55287 796 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 FHL5Q5TD97 284 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 AADACL4Q5VUY2 407 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 TMPRSS11AQ6ZMR5 421 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 KCTD7Q96MP8 289 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 STACQ99469 402 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 DUSP22Q9NRW4 184 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 POT1Q9NUX5 634 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 CDH10Q9Y6N8 788 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 LOC105369274A0A096LPK9 316 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 LOC102723532A0A0G2JNH3 316 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 H0YGG7 62 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 CDRT1O95170 752 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 TNFP01375 233 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 NDUFV2P19404 249 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 ARF3P61204 181 aaPredicted RBP20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 SNRPNP63162 240 aaKnown RBP20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 TRMT12Q53H54 448 aaKnown RBP20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 EOGTQ5NDL2 527 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 EXOSC6Q5RKV6 272 aaKnown RBP20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 ZNF620Q6ZNG0 422 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 RNF113BQ8IZP6 322 aaKnown RBP20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 OR4N4Q8N0Y3 316 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 CDRT4Q8N9R6 151 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 OR2T33Q8NG76 320 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 BAHD1Q8TBE0 780 aaPredicted RBP20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 HPS1Q92902 700 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 ARHGAP9Q9BRR9 750 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 GSTK1Q9Y2Q3 226 aa20.75■□□□□ 0.91
NKX2-1-201ENST00000354822 COL4A2P08572 1712 aa20.74■□□□□ 0.91
NKX2-1-201ENST00000354822 AK1P00568 194 aa20.74■□□□□ 0.91
NKX2-1-201ENST00000354822 DSG2Q14126 1118 aa20.74■□□□□ 0.91
NKX2-1-201ENST00000354822 GPR68Q15743 365 aa20.74■□□□□ 0.91
NKX2-1-201ENST00000354822 PGGHGQ32M88 737 aa20.74■□□□□ 0.91
NKX2-1-201ENST00000354822 SLC30A6Q6NXT4 461 aa20.74■□□□□ 0.91
NKX2-1-201ENST00000354822 OR4Q3Q8NH05 313 aa20.74■□□□□ 0.91
NKX2-1-201ENST00000354822 SETD6Q8TBK2 473 aa20.74■□□□□ 0.91
NKX2-1-201ENST00000354822 TMEM255BQ8WV15 326 aa20.74■□□□□ 0.91
NKX2-1-201ENST00000354822 GATAD2BQ8WXI9 593 aa20.74■□□□□ 0.91
NKX2-1-201ENST00000354822 SDHCQ99643 169 aaPredicted RBP20.74■□□□□ 0.91
NKX2-1-201ENST00000354822 H2AFY2Q9P0M6 372 aaPredicted RBP20.74■□□□□ 0.91
NKX2-1-201ENST00000354822 SLC7A7Q9UM01 511 aa20.74■□□□□ 0.91
NKX2-1-201ENST00000354822 EXOGQ9Y2C4 368 aaKnown RBP20.74■□□□□ 0.91
NKX2-1-201ENST00000354822 NTNG1Q9Y2I2 539 aa20.74■□□□□ 0.91
NKX2-1-201ENST00000354822 TRAPPC13A5PLN9 417 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 GPR75O95800 540 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 RPS4Y1P22090 263 aaKnown RBP20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 GABRA5P31644 462 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 GPR4P46093 362 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 SLC9A3P48764 834 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms