RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 RBM18Q96H35 190 aaKnown RBP10.17□□□□□ -0.78
RTN3-204ENST00000354497 NSL1Q96IY1 281 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 ZFP3Q96NJ6 502 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 CIB1Q99828 191 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 ERVK-6Q9BXR3 956 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 MROQ9BYG7 248 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 WWTR1Q9GZV5 400 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 C1orf21Q9H246 121 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 DDX18Q9NVP1 670 aaKnown RBP10.17□□□□□ -0.78
RTN3-204ENST00000354497 IKZF3Q9UKT9 509 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 ERVK-19Q9WJR5 959 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 CUBNO60494 3623 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 NPEPPSL1A6NEC2 478 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 CAPN14A8MX76 684 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 CDC7O00311 574 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 RTCAO00442 366 aaKnown RBP10.16□□□□□ -0.78
RTN3-204ENST00000354497 OR10H2O60403 315 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 TSPAN9O75954 239 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 SNX4O95219 450 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 ACTL6AO96019 429 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 IGKV3-11P04433 115 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 IFNA8P32881 189 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 GDF5P43026 501 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 PLIN5Q00G26 463 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 ZNF267Q14586 743 aaPredicted RBP10.16□□□□□ -0.78
RTN3-204ENST00000354497 RPS6KA2Q15349 733 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 TBCCQ15814 346 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 CLEC12BQ2HXU8 276 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 C18orf21Q32NC0 220 aaPredicted RBP10.16□□□□□ -0.78
RTN3-204ENST00000354497 CHRFAM7AQ494W8 412 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 DNAL1Q4LDG9 190 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 SLCO4C1Q6ZQN7 724 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 ARPINQ7Z6K5 226 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 PRR22Q8IZ63 422 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 PDPRQ8NCN5 879 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 C2CD4AQ8NCU7 369 aaPredicted RBP10.16□□□□□ -0.78
RTN3-204ENST00000354497 FAM83FQ8NEG4 500 aaPredicted RBP10.16□□□□□ -0.78
RTN3-204ENST00000354497 RDH11Q8TC12 318 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 SPPL2AQ8TCT8 520 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 ADAMTS16Q8TE57 1224 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 ANKRD49Q8WVL7 239 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 UCN3Q969E3 161 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 TRIM63Q969Q1 353 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 FBXL20Q96IG2 436 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 GRIP2Q9C0E4 1043 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 UBQLN3Q9H347 655 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 XAB2Q9HCS7 855 aaKnown RBP10.16□□□□□ -0.78
RTN3-204ENST00000354497 LYRM4Q9HD34 91 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 ADGRE2Q9UHX3 823 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 ERGIC3Q9Y282 383 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 ZANQ9Y493 2812 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 ARPC4-TTLL3A0A0A6YYG9 625 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 TMEM120BA0PK00 339 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 EDF1O60869 148 aaKnown RBP10.16□□□□□ -0.78
RTN3-204ENST00000354497 POU2F1P14859 743 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 CFL1P23528 166 aaKnown RBP10.16□□□□□ -0.78
RTN3-204ENST00000354497 GSTM2P28161 218 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 CD79BP40259 229 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 SSR2P43308 183 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 KCNC1P48547 511 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 P2RX3P56373 397 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 SIRPAP78324 504 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 RPP38P78345 283 aaKnown RBP10.16□□□□□ -0.78
RTN3-204ENST00000354497 GAB1Q13480 694 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 OXA1LQ15070 435 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 EBPQ15125 230 aaKnown RBP10.16□□□□□ -0.78
RTN3-204ENST00000354497 ADPRMQ3LIE5 342 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 HLA-DQA1Q5Y7H0 255 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 ANKRD34AQ69YU3 496 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 SBSNQ6UWP8 590 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 ANGPTL8Q6UXH0 198 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 ZNF793Q6ZN11 406 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 USP43Q70EL4 1123 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 VN1R5Q7Z5H4 357 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 BTLAQ7Z6A9 289 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 KRT77Q7Z794 578 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 HIPK1Q86Z02 1210 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 RBM15BQ8NDT2 890 aaKnown RBP10.16□□□□□ -0.78
RTN3-204ENST00000354497 OR1J4Q8NGS1 313 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 OR14L1PQ8NHC6 308 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 MCUR1Q96AQ8 359 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 KCNC2Q96PR1 638 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 DOK1Q99704 481 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 CENPOQ9BU64 300 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 ANGPTL4Q9BY76 406 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 ROGDIQ9GZN7 287 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 OPN3Q9H1Y3 402 aaPredicted RBP10.16□□□□□ -0.78
RTN3-204ENST00000354497 METTL7AQ9H8H3 244 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 PPCSQ9HAB8 311 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 PRDM7Q9NQW5 492 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 NKIRAS1Q9NYS0 192 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 SENP1Q9P0U3 644 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 SLC17A6Q9P2U8 582 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 MAPRE3Q9UPY8 281 aa10.16□□□□□ -0.78
RTN3-204ENST00000354497 C2orf92A0A1B0GVN3 265 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 A0A1W2PNV4 684 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 NCF1BA6NI72 391 aaPredicted RBP10.15□□□□□ -0.79
RTN3-204ENST00000354497 SNTNA6NMZ2 147 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 NCF1CA8MVU1 366 aaPredicted RBP10.15□□□□□ -0.79
RTN3-204ENST00000354497 SAP18O00422 153 aaKnown RBP10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms