RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 MYL7Q01449 175 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 SYPL1Q16563 259 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 KIF19Q2TAC6 998 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 TP53I3Q53FA7 332 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 SPATA46Q5T0L3 261 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 C9orf57Q5W0N0 161 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 HSDL2Q6YN16 418 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 GOLGA7Q7Z5G4 137 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 TRPT1Q86TN4 253 aaKnown RBP1.4□□□□□ -2.18
BRCA1-202ENST00000354071 HPS6Q86YV9 775 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 PPFIBP2Q8ND30 876 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 OR52J3Q8NH60 311 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 STARD8Q92502 1023 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 EMG1Q92979 244 aaKnown RBP1.4□□□□□ -2.18
BRCA1-202ENST00000354071 ZG16BQ96DA0 208 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 SH3YL1Q96HL8 342 aaPredicted RBP1.4□□□□□ -2.18
BRCA1-202ENST00000354071 PIWIL1Q96J94 861 aaKnown RBP1.4□□□□□ -2.18
BRCA1-202ENST00000354071 WRAP53Q9BUR4 548 aaKnown RBP1.4□□□□□ -2.18
BRCA1-202ENST00000354071 EBF2Q9HAK2 575 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 SLC17A5Q9NRA2 495 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 EXOC1Q9NV70 894 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 BARHL2Q9NY43 387 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 KLHL8Q9P2G9 620 aaPredicted RBP1.4□□□□□ -2.18
BRCA1-202ENST00000354071 THEGQ9P2T0 379 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 SLC7A8Q9UHI5 535 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 OR10H1Q9Y4A9 318 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 A0A1B0GUS0 222 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 VSTM2BA6NLU5 285 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 SOCS2O14508 198 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 ALOX15BO15296 676 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 RNF13O43567 381 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 CTAG2O75638 210 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 GLUD1P00367 558 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 MMP11P24347 488 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 CDC25AP30304 524 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 FDFT1P37268 417 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 GLUD2P49448 558 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 CASP4P49662 377 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 CCR4P51679 360 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 SUCLG1P53597 346 aaKnown RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 EEF1A1P68104 462 aaKnown RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 GK3PQ14409 553 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 PCK2Q16822 640 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 GTDC1Q4AE62 458 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 EEF1A1P5Q5VTE0 462 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 WDR25Q64LD2 544 aaPredicted RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 LRRC66Q68CR7 880 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 ACSM5Q6NUN0 579 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 G2E3Q7L622 706 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 ACOT1Q86TX2 421 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 RBM23Q86U06 439 aaKnown RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 PIM3Q86V86 326 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 PSTKQ8IV42 348 aaKnown RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 LRRC75A-AS1Q8N1F1 130 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 PYROXD2Q8N2H3 581 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 ELMOD1Q8N336 334 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 SLC16A11Q8NCK7 471 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 CATSPER1Q8NEC5 780 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 PRSS33Q8NF86 280 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 BPIFCQ8NFQ6 507 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 OR2T33Q8NG76 320 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 MPLKIPQ8TAP9 179 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 SCFD1Q8WVM8 642 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 RLN3Q8WXF3 142 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 PEX13Q92968 403 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 RPL36ALQ969Q0 106 aaKnown RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 UPRTQ96BW1 309 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 FMO2Q99518 471 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 BPIFA3Q9BQP9 254 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 CHMP4BQ9H444 224 aaKnown RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 SMOXQ9NWM0 555 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 SIGLEC8Q9NYZ4 499 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 AHSPQ9NZD4 102 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 SEC14L3Q9UDX4 400 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 TRPM1Q7Z4N2 1603 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 MAP2P11137 1827 aaKnown RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF804BA4D1E1 1349 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 IL16Q14005 1332 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 LYSTQ99698 3801 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 WRNQ14191 1432 aaPredicted RBP eCLIP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 ABCA6Q8N139 1617 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 A0A0J9YVX5 310 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 MBLAC1A4D2B0 266 aaPredicted RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 MSGN1A6NI15 193 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 C16orf97H3BN30 126 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 PES1O00541 588 aaKnown RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 DLGAP1O14490 977 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 KHDRBS3O75525 346 aaKnown RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 ECDO95905 644 aaPredicted RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 GSTA2P09210 222 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 WNT2P09544 360 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 NR4A2P43354 598 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 PPT1P50897 306 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 C1orf61Q13536 156 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 TMEM187Q14656 261 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 UBE2V2Q15819 145 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 PARP6Q2NL67 630 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 FAM106AQ4KMX7 169 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 UNQ6126/PRO20091Q6UXV3 157 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms