RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 ITGA10O75578 1167 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 ARL6IP5O75915 188 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 MT-ND5P03915 603 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 AHCYP23526 432 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 SCN1BQ07699 218 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 DEFB110Q30KQ9 67 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 CRTC2Q53ET0 693 aaPredicted RBP11.42□□□□□ -0.58
SMAD9-201ENST00000350148 THSD1Q9NS62 852 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 TM7SF3Q9NS93 570 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 TESQ9UGI8 421 aaKnown RBP11.42□□□□□ -0.58
SMAD9-201ENST00000350148 A0A1W2PPC1 479 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 METTL12A8MUP2 240 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 C17orf105B2RV13 164 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 GREM1O60565 184 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 KCNK5O95279 499 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 RPS2P15880 293 aaKnown RBP11.42□□□□□ -0.58
SMAD9-201ENST00000350148 XCR1P46094 333 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 OLFML2AQ68BL7 652 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 PRSS48Q7RTY5 328 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 ZNF761Q86XN6 746 aaPredicted RBP11.42□□□□□ -0.58
SMAD9-201ENST00000350148 GPALPP1Q8IXQ4 340 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 SLC43A2Q8N370 569 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 SLC5A8Q8N695 610 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 PROKR2Q8NFJ6 384 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 PMEPA1Q969W9 287 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 SLC6A17Q9H1V8 727 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 LILRA5A6NI73 299 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 PLPP1O14494 284 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 HCRTR2O43614 444 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 SLC5A2P31639 672 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 HSDL2Q6YN16 418 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 CAMKMTQ7Z624 323 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 CRIPAKQ8N1N5 446 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 MEIOBQ8N635 442 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 SLC37A2Q8TED4 501 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 GAB3Q8WWW8 586 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 MS4A6EQ96DS6 147 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 ZNF419Q96HQ0 510 aaPredicted RBP11.42□□□□□ -0.58
SMAD9-201ENST00000350148 AMDHD1Q96NU7 426 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 PPP4R1LQ9P1A2 415 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 SLC22A7Q9Y694 548 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 LCTP09848 1927 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 GXYLT2A0PJZ3 443 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 SMCO3A2RU48 225 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 HMGB3O15347 200 aaKnown RBP11.42□□□□□ -0.58
SMAD9-201ENST00000350148 CTNSO60931 367 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 GABRG2P18507 467 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 HTR3AP46098 478 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 PPP2CBP62714 309 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 PPP2CAP67775 309 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 SELPLGQ14242 412 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 C1orf94Q6P1W5 598 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 BPHLQ86WA6 291 aaPredicted RBP11.42□□□□□ -0.58
SMAD9-201ENST00000350148 TMEFF1Q8IYR6 380 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 RNF113BQ8IZP6 322 aaKnown RBP11.42□□□□□ -0.58
SMAD9-201ENST00000350148 HORMAD2Q8N7B1 307 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 NT5CQ8TCD5 201 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 RSC1A1Q92681 617 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 SLC25A36Q96CQ1 311 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 LMF2Q9BU23 707 aaKnown RBP11.42□□□□□ -0.58
SMAD9-201ENST00000350148 FAIMQ9NVQ4 179 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 C5AR2Q9P296 337 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 TMEM14AQ9Y6G1 99 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 C2orf92A0A1B0GVN3 265 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 ZNF701M0R085 212 aaPredicted RBP11.42□□□□□ -0.58
SMAD9-201ENST00000350148 PLOD2O00469 737 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 GNAO1P09471 354 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 FAUP35544 74 aaKnown RBP11.42□□□□□ -0.58
SMAD9-201ENST00000350148 EMP2P54851 167 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 AGERQ15109 404 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 CDKN3Q16667 212 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 FAM122CQ6P4D5 195 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 TMEM151AQ8N4L1 468 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 TP53INP1Q96A56 240 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 CMKLR1Q99788 373 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 ANKRA2Q9H9E1 313 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 NMNAT1Q9HAN9 279 aaPredicted RBP11.42□□□□□ -0.58
SMAD9-201ENST00000350148 WSB2Q9NYS7 404 aaPredicted RBP11.42□□□□□ -0.58
SMAD9-201ENST00000350148 CEPT1Q9Y6K0 416 aa11.42□□□□□ -0.58
SMAD9-201ENST00000350148 PHYHO14832 338 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 ANKRD28O15084 1053 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 ENTPD6O75354 484 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 CDC123O75794 336 aaPredicted RBP11.41□□□□□ -0.58
SMAD9-201ENST00000350148 PCDH1Q08174 1060 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 FAM189A2Q15884 450 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 LRIT3Q3SXY7 679 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 SLC36A3Q495N2 470 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 PLEKHG7Q6ZR37 379 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 ATP6V1C2Q8NEY4 427 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 ACOT11Q8WXI4 607 aaPredicted RBP11.41□□□□□ -0.58
SMAD9-201ENST00000350148 RBP7Q96R05 134 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 STACQ99469 402 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 SLC6A5Q9Y345 797 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 FUOMA2VDF0 154 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 POM121BA6NF01 834 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 SLC1A7O00341 560 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 SOX14O95416 240 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 MAPK3P27361 379 aaPredicted RBP11.41□□□□□ -0.58
SMAD9-201ENST00000350148 SLC19A1P41440 591 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms