RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 MINDY4Q4G0A6 757 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 ZNF57Q68EA5 555 aaPredicted RBP7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 ARMC6Q6NXE6 501 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 BHLHB9Q6PI77 547 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 ZNF704Q6ZNC4 412 aaPredicted RBP7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 FAM92BQ6ZTR7 304 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 TRILQ7L0X0 811 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 ANKRD33Q7Z3H0 272 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 HSD17B13Q7Z5P4 300 aaPredicted RBP7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 PIM3Q86V86 326 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 PPP1R3BQ86XI6 285 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 DENND1CQ8IV53 801 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 SAMD14Q8IZD0 417 aaPredicted RBP7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 ADGRF3Q8IZF5 1079 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 TMEM86AQ8N2M4 240 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 PGBD5Q8N414 524 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 OR10G2Q8NGC3 310 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 SLC22A8Q8TCC7 542 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 NELL1Q92832 810 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 OTULINQ96BN8 352 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 UPRTQ96BW1 309 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 SIPA1Q96FS4 1042 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 OTUB1Q96FW1 271 aaPredicted RBP7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 MARS2Q96GW9 593 aaKnown RBP7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 BOD1Q96IK1 185 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 KCTD7Q96MP8 289 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 LINC00052Q96N35 136 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 RBP7Q96R05 134 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 GFM1Q96RP9 751 aaKnown RBP7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 C12orf57Q99622 126 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 NPAS1Q99742 590 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 RTP3Q9BQQ7 232 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 CCM2Q9BSQ5 444 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 C1orf43Q9BWL3 253 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 REG4Q9BYZ8 158 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 SLC19A3Q9BZV2 496 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 SLC25A51Q9H1U9 297 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 IKZF5Q9H5V7 419 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 ISYNA1Q9NPH2 558 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 PIGVQ9NUD9 493 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 TAS2R13Q9NYV9 303 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 CD274Q9NZQ7 290 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 CPNE7Q9UBL6 633 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 PLEKHB1Q9UF11 243 aaPredicted RBP7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 ZDHHC8Q9ULC8 765 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 GSTK1Q9Y2Q3 226 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 MRPS7Q9Y2R9 242 aaKnown RBP7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 KCNK7Q9Y2U2 307 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 LSM2Q9Y333 95 aaKnown RBP7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 NUBP2Q9Y5Y2 271 aa7.21□□□□□ -1.26
UBE2D3-204ENST00000349311 MEIKINA0A087WXM9 373 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 TRAV19A0A0A6YYK7 116 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 CENPVL1A0A0U1RR11 272 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 IRGMA1A4Y4 181 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 ARL5CA6NH57 179 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 A8MXK9 166 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 FAM72CH0Y354 149 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 TMEM189-UBE2V1I3L0A0 370 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 GATCO43716 136 aaKnown RBP7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 TPST2O60704 377 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 FZD7O75084 574 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 RPP40O75818 363 aaKnown RBP7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 AP2A2O94973 939 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 ZFPL1O95159 310 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 SNAPINO95295 136 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 OLFM2O95897 454 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 OTCP00480 354 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 CXCL10P02778 98 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 IFNA4P05014 189 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 HLA-DQB2P05538 268 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 FHP07954 510 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 PRPS2P11908 318 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 RORAP35398 523 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 IDH2P48735 452 aaKnown RBP7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 HSPA7P48741 367 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 RAG2P55895 527 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 RPL38P63173 70 aaKnown RBP7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 VLDLRP98155 873 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 PUDPQ08623 228 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 VEZF1Q14119 521 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 MLC1Q15049 377 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 SPHARQ15513 63 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 SNAPC1Q16533 368 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 SPIN4Q56A73 249 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 SPANXN4Q5MJ08 99 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 FAM72AQ5TYM5 149 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 FAM219BQ5XKK7 198 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 FAM72DQ6L9T8 149 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 CNIH2Q6PI25 160 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 FBXO46Q6PJ61 603 aaPredicted RBP7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 CORO6Q6QEF8 472 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 ZNF730Q6ZMV8 503 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 RASSF6Q6ZTQ3 369 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 PTCHD4Q6ZW05 846 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 SLC24A5Q71RS6 500 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 CHMP1BQ7LBR1 199 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 FAM72BQ86X60 149 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 GPSM1Q86YR5 675 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 LIX1Q8N485 282 aa7.2□□□□□ -1.26
UBE2D3-204ENST00000349311 MS4A15Q8N5U1 240 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms