RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 USP34Q70CQ2 3546 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 POU3F2P20265 443 aaPredicted RBP17.5■□□□□ 0.39
SCARF1-202ENST00000348987 DRD5P21918 477 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 ACSL1P33121 698 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 SLC6A11P48066 632 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 EOGTQ5NDL2 527 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 GRHL2Q6ISB3 625 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 SLC36A4Q6YBV0 504 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 ADAMTS14Q8WXS8 1223 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 RAB8BQ92930 207 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 TCEAL4Q96EI5 215 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 TMEM19Q96HH6 336 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 DDOQ99489 341 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 CHIAQ9BZP6 476 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 SLAMF7Q9NQ25 335 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 ZMAT5Q9UDW3 170 aaKnown RBP17.5■□□□□ 0.39
SCARF1-202ENST00000348987 SLC25A13Q9UJS0 675 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 POMT2Q9UKY4 750 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 ACSL5Q9ULC5 683 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 SZT2Q5T011 3432 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 TCRBV16S1A1N1A0A5B0 115 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 HNRNPCL2B2RXH8 293 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 CTSLP07711 333 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 H2AFB2P0C5Z0 115 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 ERVK-21P61565 698 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 TMPRSS11BQ86T26 416 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 ADIPOR2Q86V24 386 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 MMP21Q8N119 569 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 HORMAD2Q8N7B1 307 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 OR4K5Q8NGD3 323 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 SPRYD4Q8WW59 207 aaPredicted RBP17.49■□□□□ 0.39
SCARF1-202ENST00000348987 CTPS2Q9NRF8 586 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 SPG21Q9NZD8 308 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 PTGFRNQ9P2B2 879 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 CLEC4AQ9UMR7 237 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 GRM6O15303 877 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 HSD3B2P26439 372 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 RBMS1P29558 406 aaKnown RBP17.49■□□□□ 0.39
SCARF1-202ENST00000348987 MEF2AQ02078 507 aaPredicted RBP17.49■□□□□ 0.39
SCARF1-202ENST00000348987 MINDY4Q4G0A6 757 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 SYTL3Q4VX76 610 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 HENMT1Q5T8I9 393 aaKnown RBP17.49■□□□□ 0.39
SCARF1-202ENST00000348987 RGS7BPQ6MZT1 257 aaPredicted RBP17.49■□□□□ 0.39
SCARF1-202ENST00000348987 C3P1Q6ZMU1 363 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 ANKRD33Q7Z3H0 272 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 COMMD6Q7Z4G1 85 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 KLBQ86Z14 1044 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 TMEM159Q96B96 161 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 CXorf40BQ96DE9 158 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 PDXPQ96GD0 296 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 FUZQ9BT04 418 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 ZNF416Q9BWM5 594 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 NKIRAS2Q9NYR9 191 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 CPNE7Q9UBL6 633 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 RASD1Q9Y272 281 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 ZNF175Q9Y473 711 aa17.49■□□□□ 0.39
SCARF1-202ENST00000348987 KIAA1671Q9BY89 1806 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 CCL16O15467 120 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 SOX30O94993 753 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 LRG1P02750 347 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 DRD2P14416 443 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 CBX5P45973 191 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 BLVRAP53004 296 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 TAS2R50P59544 299 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 ERVFC1P60507 584 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 HBMQ6B0K9 141 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 ANKRD53Q8N9V6 530 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 MOSPD2Q8NHP6 518 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 ZNF689Q96CS4 500 aaPredicted RBP17.48■□□□□ 0.39
SCARF1-202ENST00000348987 SLC38A2Q96QD8 506 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 SERHL2Q9H4I8 314 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 CXorf36Q9H7Y0 433 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 A4GNTQ9UNA3 340 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 HCFC2Q9Y5Z7 792 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 ALDOBP05062 364 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 LPLP06858 475 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 C8AP07357 584 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 OR10A3P58181 314 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 GRIN2CQ14957 1233 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 TCTE1Q5JU00 501 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 ZDHHC20Q5W0Z9 365 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 CNKSR3Q6P9H4 555 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 OVCH2Q7RTZ1 564 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 UXS1Q8NBZ7 420 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 WDR48Q8TAF3 677 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 FOPNLQ96NB1 174 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 SARGQ9BW04 601 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 CBLCQ9ULV8 474 aa17.48■□□□□ 0.39
SCARF1-202ENST00000348987 MRPS7Q9Y2R9 242 aaKnown RBP17.48■□□□□ 0.39
SCARF1-202ENST00000348987 IRGMA1A4Y4 181 aa17.47■□□□□ 0.39
SCARF1-202ENST00000348987 TUBAL3A6NHL2 446 aa17.47■□□□□ 0.39
SCARF1-202ENST00000348987 ANKDD1BA6NHY2 528 aa17.47■□□□□ 0.39
SCARF1-202ENST00000348987 KRBOX1C9JBD0 128 aa17.47■□□□□ 0.39
SCARF1-202ENST00000348987 MT-ND4P03905 459 aa17.47■□□□□ 0.39
SCARF1-202ENST00000348987 SRPRAP08240 638 aaKnown RBP17.47■□□□□ 0.39
SCARF1-202ENST00000348987 ANKRD34CP0C6C1 535 aa17.47■□□□□ 0.39
SCARF1-202ENST00000348987 TIMP2P16035 220 aa17.47■□□□□ 0.39
SCARF1-202ENST00000348987 KIAA1024LP59773 190 aa17.47■□□□□ 0.39
SCARF1-202ENST00000348987 POLR2LP62875 67 aaKnown RBP17.47■□□□□ 0.39
SCARF1-202ENST00000348987 MAP4K2Q12851 820 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms