RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 GATSQ8NAP1 163 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 DOK4Q8TEW6 326 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 PMM1Q92871 262 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 SBF2Q86WG5 1849 aa10.27□□□□□ -0.76
CLCN6-202ENST00000346436 FAM25EA8MYX2 175 aa10.27□□□□□ -0.76
CLCN6-202ENST00000346436 ZNF878C9JN71 531 aa10.27□□□□□ -0.76
CLCN6-202ENST00000346436 CRYABP02511 175 aaKnown RBP10.27□□□□□ -0.76
CLCN6-202ENST00000346436 CCR5P51681 352 aa10.27□□□□□ -0.76
CLCN6-202ENST00000346436 C9orf50Q5SZB4 431 aa10.27□□□□□ -0.76
CLCN6-202ENST00000346436 DCDC5Q6ZRR9 648 aa10.27□□□□□ -0.76
CLCN6-202ENST00000346436 RFLNAQ6ZTI6 216 aa10.27□□□□□ -0.76
CLCN6-202ENST00000346436 DGLUCYQ7Z3D6 616 aa10.27□□□□□ -0.76
CLCN6-202ENST00000346436 LRRC17Q8N6Y2 441 aa10.27□□□□□ -0.76
CLCN6-202ENST00000346436 GTF2H4Q92759 462 aa10.27□□□□□ -0.76
CLCN6-202ENST00000346436 RPL3LQ92901 407 aaKnown RBP10.27□□□□□ -0.76
CLCN6-202ENST00000346436 HCAR1Q9BXC0 346 aa10.27□□□□□ -0.76
CLCN6-202ENST00000346436 HES7Q9BYE0 225 aa10.27□□□□□ -0.76
CLCN6-202ENST00000346436 TTTY10Q9BZA0 68 aa10.27□□□□□ -0.76
CLCN6-202ENST00000346436 LOC105369274A0A096LPK9 316 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 OR7A17O14581 309 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 KLK10O43240 276 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 CACNG3O60359 315 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 RAD51DO75771 328 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 ATF6P18850 670 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 MPLP40238 635 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 CRISP1P54107 249 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 CDKL4Q5MAI5 379 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 KIAA0907Q7Z7F0 614 aaPredicted RBP10.27□□□□□ -0.77
CLCN6-202ENST00000346436 KLHDC8AQ8IYD2 350 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 OR4N4Q8N0Y3 316 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 GAL3ST3Q96A11 431 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 CIDECQ96AQ7 238 aaPredicted RBP10.27□□□□□ -0.77
CLCN6-202ENST00000346436 SLC19A3Q9BZV2 496 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 DCAF13Q9NV06 445 aaKnown RBP10.27□□□□□ -0.77
CLCN6-202ENST00000346436 DNAJB11Q9UBS4 358 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 TMEM14AQ9Y6G1 99 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 FIGNL2A6NMB9 653 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 KIAA0513O60268 411 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 TNFSF15O95150 251 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 S1PR1P21453 382 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 HOXD9P28356 352 aaPredicted RBP10.27□□□□□ -0.77
CLCN6-202ENST00000346436 GMFBP60983 142 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 RELAQ04206 551 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 EEF1A1P5Q5VTE0 462 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 CARD17Q5XLA6 110 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 MTFR2Q6P444 385 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 BORAQ6PGQ7 559 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 TCEAL3Q969E4 200 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 TRIM43Q96BQ3 446 aaPredicted RBP10.27□□□□□ -0.77
CLCN6-202ENST00000346436 MCHR1Q99705 422 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 HDAC8Q9BY41 377 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 LAMP5Q9UJQ1 280 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 INTS6Q9UL03 887 aaKnown RBP10.27□□□□□ -0.77
CLCN6-202ENST00000346436 TRGV8A0A0C4DH27 118 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 ALPLP05186 524 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 KIR2DL3P43628 341 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 MAN2A2P49641 1150 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 RPS26P11Q5JNZ5 115 aaPredicted RBP10.27□□□□□ -0.77
CLCN6-202ENST00000346436 DTWD2Q8NBA8 298 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 CPEB3Q8NE35 698 aaKnown RBP10.27□□□□□ -0.77
CLCN6-202ENST00000346436 UFD1Q92890 307 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 MYEOVQ96EZ4 313 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 ASB16Q96NS5 453 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 SLC30A2Q9BRI3 323 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 MUTYHQ9UIF7 546 aa10.27□□□□□ -0.77
CLCN6-202ENST00000346436 A0A075B6Q4 140 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 A0A1W2PPH5 198 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 FEZF1A0PJY2 475 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 KRBA1A5PL33 1030 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 ZNF891A8MT65 544 aaPredicted RBP10.26□□□□□ -0.77
CLCN6-202ENST00000346436 ZNF879B4DU55 563 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 SURF4O15260 269 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 B3GALT4O96024 378 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 PTGER1P34995 402 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 SCN1AP35498 2009 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 PIGAP37287 484 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 CDKN2CP42773 168 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 ARPC4P59998 168 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 HERV-K104P61576 105 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 RUNDC3AQ59EK9 446 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 TMPRSS9Q7Z410 1059 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 ANKRD13BQ86YJ7 626 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 SLC2A12Q8TD20 617 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 SLC6A18Q96N87 628 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 ZFP3Q96NJ6 502 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 TLCD2A6NGC4 264 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 TRIM64BA6NI03 449 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 C2CD4DB7Z1M9 353 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 SLC16A8O95907 504 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 NUDT7P0C024 238 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 C21orf33P30042 268 aaPredicted RBP10.26□□□□□ -0.77
CLCN6-202ENST00000346436 HK3P52790 923 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 SCGB2A2Q13296 93 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 ZNF517Q6ZMY9 492 aaPredicted RBP10.26□□□□□ -0.77
CLCN6-202ENST00000346436 MEX3DQ86XN8 651 aaKnown RBP10.26□□□□□ -0.77
CLCN6-202ENST00000346436 C1orf210Q8IVY1 113 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 KLHL36Q8N4N3 616 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 ZFP41Q8N8Y5 198 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 ZNF583Q96ND8 569 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 FOXQ1Q9C009 403 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms