RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ADRB1P08588 477 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 MPC1LP0DKB6 136 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 ACP5P13686 325 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 TYRP14679 529 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 TGFBR1P36897 503 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 CCL23P55773 120 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 CTU2Q2VPK5 515 aaKnown RBP11.46□□□□□ -0.57
COL12A1-202ENST00000345356 FCRLBQ6BAA4 426 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 ZNF534Q76KX8 674 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 ABHD13Q7L211 337 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 TMEM200AQ86VY9 491 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 SFXN2Q96NB2 322 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 ZNF768Q9H5H4 540 aaKnown RBP11.46□□□□□ -0.57
COL12A1-202ENST00000345356 CLMPQ9H6B4 373 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 FBRSQ9HAH7 460 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 Q9N2J8 555 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 MEPEQ9NQ76 525 aaPredicted RBP11.46□□□□□ -0.57
COL12A1-202ENST00000345356 BTNL2Q9UIR0 455 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 GGT3PA6NGU5 568 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 FBXO45P0C2W1 286 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 GKP32189 559 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 VEGFCP49767 419 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 CLCNKAP51800 687 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 FAM180BQ6P0A1 224 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 SLC51BQ86UW2 128 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 PELI3Q8N2H9 469 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 KLRG1Q96E93 195 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 ABRACLQ9P1F3 81 aa11.46□□□□□ -0.57
COL12A1-202ENST00000345356 FAM155AB1AL88 458 aaPredicted RBP11.46□□□□□ -0.58
COL12A1-202ENST00000345356 ACP2P11117 423 aa11.46□□□□□ -0.58
COL12A1-202ENST00000345356 RPL17P18621 184 aaKnown RBP11.46□□□□□ -0.58
COL12A1-202ENST00000345356 GDNFP39905 211 aa11.46□□□□□ -0.58
COL12A1-202ENST00000345356 MAGEB1P43366 347 aa11.46□□□□□ -0.58
COL12A1-202ENST00000345356 CCR6P51684 374 aa11.46□□□□□ -0.58
COL12A1-202ENST00000345356 AQP6Q13520 282 aa11.46□□□□□ -0.58
COL12A1-202ENST00000345356 LEXMQ3ZCV2 418 aa11.46□□□□□ -0.58
COL12A1-202ENST00000345356 ZNF551Q7Z340 670 aaPredicted RBP11.46□□□□□ -0.58
COL12A1-202ENST00000345356 FRZBQ92765 325 aa11.46□□□□□ -0.58
COL12A1-202ENST00000345356 HAPLN2Q9GZV7 340 aa11.46□□□□□ -0.58
COL12A1-202ENST00000345356 GOLGA4Q13439 2230 aaKnown RBP11.46□□□□□ -0.58
COL12A1-202ENST00000345356 H7BY64 318 aa11.46□□□□□ -0.58
COL12A1-202ENST00000345356 SCDO00767 359 aa11.46□□□□□ -0.58
COL12A1-202ENST00000345356 NPC1O15118 1278 aa11.46□□□□□ -0.58
COL12A1-202ENST00000345356 KCNE1P15382 129 aa11.46□□□□□ -0.58
COL12A1-202ENST00000345356 SPNP16150 400 aa11.46□□□□□ -0.58
COL12A1-202ENST00000345356 MAT2AP31153 395 aaKnown RBP11.46□□□□□ -0.58
COL12A1-202ENST00000345356 SLC26A5P58743 744 aa11.46□□□□□ -0.58
COL12A1-202ENST00000345356 IL13RA1P78552 427 aa11.46□□□□□ -0.58
COL12A1-202ENST00000345356 SOWAHCQ53LP3 525 aaPredicted RBP11.46□□□□□ -0.58
COL12A1-202ENST00000345356 TMEM107Q6UX40 140 aa11.46□□□□□ -0.58
COL12A1-202ENST00000345356 SIAH3Q8IW03 269 aa11.46□□□□□ -0.58
COL12A1-202ENST00000345356 CYB561A3Q8NBI2 242 aa11.46□□□□□ -0.58
COL12A1-202ENST00000345356 OR4F15Q8NGB8 312 aa11.46□□□□□ -0.58
COL12A1-202ENST00000345356 OR13C3Q8NGS6 347 aa11.46□□□□□ -0.58
COL12A1-202ENST00000345356 SLCO4A1Q96BD0 722 aa11.46□□□□□ -0.58
COL12A1-202ENST00000345356 PRAP1Q96NZ9 151 aa11.46□□□□□ -0.58
COL12A1-202ENST00000345356 CDC6Q99741 560 aa11.46□□□□□ -0.58
COL12A1-202ENST00000345356 J3KTA2 159 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 ZNF16P17020 682 aaPredicted RBP11.45□□□□□ -0.58
COL12A1-202ENST00000345356 ZNF8P17098 575 aaPredicted RBP11.45□□□□□ -0.58
COL12A1-202ENST00000345356 CDK2P24941 298 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 ID2Q02363 134 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 MAP2K5Q13163 448 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 SMUG1Q53HV7 270 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 IER5LQ5T953 404 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 GPRIN1Q7Z2K8 1008 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 PHOSPHO1Q8TCT1 267 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 CD200R1Q8TD46 325 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 UBE2FQ969M7 185 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 LIN37Q96GY3 246 aaPredicted RBP11.45□□□□□ -0.58
COL12A1-202ENST00000345356 DCLRE1CQ96SD1 692 aaKnown RBP11.45□□□□□ -0.58
COL12A1-202ENST00000345356 URM1Q9BTM9 101 aaKnown RBP11.45□□□□□ -0.58
COL12A1-202ENST00000345356 SMCO4Q9NRQ5 59 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 BABAM2Q9NXR7 383 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 MYEF2Q9P2K5 600 aaKnown RBP11.45□□□□□ -0.58
COL12A1-202ENST00000345356 SPO11Q9Y5K1 396 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 PIRO00625 290 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 EMC8O43402 210 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 CCKBRP32239 447 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 SERPINF1P36955 418 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 NKX3-2P78367 333 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 AAK1Q2M2I8 961 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 IRAK1BP1Q5VVH5 260 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 PSRC1Q6PGN9 363 aaPredicted RBP11.45□□□□□ -0.58
COL12A1-202ENST00000345356 MAMDC4Q6UXC1 1216 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 FUNDC1Q8IVP5 155 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 MRPL41Q8IXM3 137 aaKnown RBP11.45□□□□□ -0.58
COL12A1-202ENST00000345356 ZNF680Q8NEM1 530 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 NANPQ8TBE9 248 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 TMEM163Q8TC26 289 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 C16orf78Q8WTQ4 265 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 SMPDL3BQ92485 455 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 ISL2Q96A47 359 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 SLC41A3Q96GZ6 507 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 FAM83CQ9BQN1 747 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 MRI1Q9BV20 369 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 DEC1Q9P2X7 70 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 CSO75390 466 aaKnown RBP11.45□□□□□ -0.58
COL12A1-202ENST00000345356 DDNO94850 711 aaPredicted RBP11.45□□□□□ -0.58
COL12A1-202ENST00000345356 ADH1AP07327 375 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms