RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 PLPP4Q5VZY2 271 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 OR2T11Q8NH01 316 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 OR4K13Q8NH42 304 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 ZNF417Q8TAU3 575 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 SCAMP4Q969E2 229 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 RCE1Q9Y256 329 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 E2F3O00716 465 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 SYPP08247 313 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 GABRA3P34903 492 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 LUMP51884 338 aaPredicted RBP17.09■□□□□ 0.33
SMC4-201ENST00000344722 RIDAP52758 137 aaKnown RBP17.09■□□□□ 0.33
SMC4-201ENST00000344722 TXNDC8Q6A555 127 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 CYB5D2Q8WUJ1 264 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 PDLIM5Q96HC4 596 aaKnown RBP17.09■□□□□ 0.33
SMC4-201ENST00000344722 CDC6Q99741 560 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 KCNJ16Q9NPI9 418 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 PNO1Q9NRX1 252 aaKnown RBP17.09■□□□□ 0.33
SMC4-201ENST00000344722 NCR1O76036 304 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 F2P00734 622 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 TCRBP04435 133 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 H2BFMP0C1H6 154 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 ETV3P41162 512 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 PEA15Q15121 130 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 DUSP6Q16828 381 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 AAK1Q2M2I8 961 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 AVPI1Q5T686 147 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 APOOLQ6UXV4 268 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 RBP7Q96R05 134 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 OR5M11Q96RB7 305 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 SSX3Q99909 188 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 SRA1Q9HD15 236 aaKnown RBP17.09■□□□□ 0.33
SMC4-201ENST00000344722 IL20RAQ9UHF4 553 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 Q9Y3F1 56 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 ZNF142P52746 1687 aaPredicted RBP17.09■□□□□ 0.33
SMC4-201ENST00000344722 SLC33A1O00400 549 aaPredicted RBP17.09■□□□□ 0.33
SMC4-201ENST00000344722 SCAMP1O15126 338 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 PSMB1P20618 241 aaKnown RBP17.09■□□□□ 0.33
SMC4-201ENST00000344722 RAB11FIP2Q7L804 512 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 C12orf40Q86WS4 652 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 ARHGAP12Q8IWW6 846 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 FYTTD1Q96QD9 318 aaKnown RBP17.09■□□□□ 0.33
SMC4-201ENST00000344722 A6NIN4 97 aa17.08■□□□□ 0.33
SMC4-201ENST00000344722 CSO75390 466 aaKnown RBP17.08■□□□□ 0.33
SMC4-201ENST00000344722 C8AP07357 584 aa17.08■□□□□ 0.33
SMC4-201ENST00000344722 MASP1P48740 699 aa17.08■□□□□ 0.33
SMC4-201ENST00000344722 ALG10Q5BKT4 473 aa17.08■□□□□ 0.33
SMC4-201ENST00000344722 PCNPQ8WW12 178 aaKnown RBP17.08■□□□□ 0.33
SMC4-201ENST00000344722 MBOAT4Q96T53 435 aa17.08■□□□□ 0.33
SMC4-201ENST00000344722 VRK1Q99986 396 aaPredicted RBP17.08■□□□□ 0.33
SMC4-201ENST00000344722 CARS2Q9HA77 564 aaKnown RBP17.08■□□□□ 0.33
SMC4-201ENST00000344722 ZNF701Q9NV72 531 aaPredicted RBP17.08■□□□□ 0.33
SMC4-201ENST00000344722 DIMT1Q9UNQ2 313 aaKnown RBP17.08■□□□□ 0.33
SMC4-201ENST00000344722 MEGF11A6BM72 1044 aa17.08■□□□□ 0.33
SMC4-201ENST00000344722 SDC3O75056 442 aa17.08■□□□□ 0.33
SMC4-201ENST00000344722 RAB40ALP0C0E4 278 aa17.08■□□□□ 0.33
SMC4-201ENST00000344722 POLR2CP19387 275 aaPredicted RBP17.08■□□□□ 0.33
SMC4-201ENST00000344722 M6PRP20645 277 aa17.08■□□□□ 0.33
SMC4-201ENST00000344722 DDCP20711 480 aa17.08■□□□□ 0.33
SMC4-201ENST00000344722 CBLP22681 906 aa17.08■□□□□ 0.33
SMC4-201ENST00000344722 SSX2Q16385 188 aa17.08■□□□□ 0.33
SMC4-201ENST00000344722 C14orf28Q4W4Y0 310 aa17.08■□□□□ 0.33
SMC4-201ENST00000344722 CMTM8Q8IZV2 173 aa17.08■□□□□ 0.33
SMC4-201ENST00000344722 RAB40AQ8WXH6 277 aa17.08■□□□□ 0.33
SMC4-201ENST00000344722 NAV1Q8NEY1 1877 aa17.08■□□□□ 0.32
SMC4-201ENST00000344722 SMCO3A2RU48 225 aa17.08■□□□□ 0.32
SMC4-201ENST00000344722 COCHO43405 550 aa17.08■□□□□ 0.32
SMC4-201ENST00000344722 MAT2AP31153 395 aaKnown RBP17.08■□□□□ 0.32
SMC4-201ENST00000344722 CLVS2Q5SYC1 327 aa17.08■□□□□ 0.32
SMC4-201ENST00000344722 OR2G6Q5TZ20 316 aa17.08■□□□□ 0.32
SMC4-201ENST00000344722 SLC2A11Q9BYW1 496 aa17.08■□□□□ 0.32
SMC4-201ENST00000344722 IGFLR1Q9H665 355 aa17.08■□□□□ 0.32
SMC4-201ENST00000344722 OSGIN1Q9UJX0 560 aa17.08■□□□□ 0.32
SMC4-201ENST00000344722 CHATP28329 748 aa17.08■□□□□ 0.32
SMC4-201ENST00000344722 ACTR1BP42025 376 aa17.08■□□□□ 0.32
SMC4-201ENST00000344722 ACTR1AP61163 376 aa17.08■□□□□ 0.32
SMC4-201ENST00000344722 TRNP1Q6NT89 227 aa17.08■□□□□ 0.32
SMC4-201ENST00000344722 PODNL1Q6PEZ8 512 aa17.08■□□□□ 0.32
SMC4-201ENST00000344722 OR10K1Q8NGX5 313 aa17.08■□□□□ 0.32
SMC4-201ENST00000344722 ANGPTL6Q8NI99 470 aa17.08■□□□□ 0.32
SMC4-201ENST00000344722 GFOD1Q9NXC2 390 aa17.08■□□□□ 0.32
SMC4-201ENST00000344722 EDDM13A0A1B0GTR0 161 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 ZNF736B4DX44 427 aaPredicted RBP17.07■□□□□ 0.32
SMC4-201ENST00000344722 GPR89AB7ZAQ6 455 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 ZNF195O14628 629 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 GPR89BP0CG08 455 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 MTNR1BP49286 362 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 GHRHRQ02643 423 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 MEF2DQ14814 521 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 ZNF566Q969W8 418 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 PRRT1Q99946 306 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 MAN2C1Q9NTJ4 1040 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 V9GY05 133 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 A0A1W2PQ45 241 aaPredicted RBP17.07■□□□□ 0.32
SMC4-201ENST00000344722 A0A1W2PQY0 241 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 A0A1W2PRU2 124 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 PPP1R3DO95685 299 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 CSTAP01040 98 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 GASTP01350 101 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 ASGR2P07307 311 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 SLC14A2Q15849 920 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms