RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 FPR3P25089 353 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 SHC1P29353 583 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 CALCRP30988 508 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 SLC11A1P49279 550 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 BLVRAP53004 296 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 MANFP55145 182 aaKnown RBP9.05□□□□□ -0.96
HOXA1-201ENST00000343060 DGCR2P98153 550 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 MLC1Q15049 377 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 TRAM1Q15629 374 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 PGGHGQ32M88 737 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 C22orf39Q6P5X5 142 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 C3P1Q6ZMU1 363 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 HS6ST3Q8IZP7 471 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 CPXM2Q8N436 756 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 TRAM1L1Q8N609 369 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 LILRA3Q8N6C8 439 aaPredicted RBP9.05□□□□□ -0.96
HOXA1-201ENST00000343060 SIRT6Q8N6T7 355 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 FAM98AQ8NCA5 519 aaKnown RBP9.05□□□□□ -0.96
HOXA1-201ENST00000343060 FAM71CQ8NEG0 241 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 SLC5A11Q8WWX8 675 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 OSTF1Q92882 214 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 UBE2E3Q969T4 207 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 SGTBQ96EQ0 304 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 CD93Q9NPY3 652 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 ZC4H2Q9NQZ6 224 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 ACSS1Q9NUB1 689 aaPredicted RBP9.05□□□□□ -0.96
HOXA1-201ENST00000343060 BABAM2Q9NXR7 383 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 HCN3Q9P1Z3 774 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 SYT5O00445 386 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 SSNA1O43805 119 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 FGF2P09038 288 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 CD3GP09693 182 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 STAT5AP42229 794 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 CCR6P51684 374 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 CTSCP53634 463 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 OR10A3P58181 314 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 TSPAN5P62079 268 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 PITPNAQ00169 270 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 GNA13Q14344 377 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 HENMT1Q5T8I9 393 aaKnown RBP9.05□□□□□ -0.96
HOXA1-201ENST00000343060 KIAA1161Q6NSJ0 714 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 PRSS55Q6UWB4 352 aaPredicted RBP9.05□□□□□ -0.96
HOXA1-201ENST00000343060 FAM198BQ6UWH4 519 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 SLITRK4Q8IW52 837 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 GJD3Q8N144 294 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 SPICQ8N5J4 248 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 TEX19Q8NA77 164 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 BBS1Q8NFJ9 593 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 DIO2Q92813 273 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 RIT1Q92963 219 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 MARC2Q969Z3 335 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 TM4SF18Q96CE8 201 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 FOPNLQ96NB1 174 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 SFXN2Q96NB2 322 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 CAMK1GQ96NX5 476 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 DDOQ99489 341 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 SPATA5L1Q9BVQ7 753 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 SORBS1Q9BX66 1292 aaKnown RBP9.05□□□□□ -0.96
HOXA1-201ENST00000343060 C20orf85Q9H1P6 137 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 CDCP1Q9H5V8 836 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 METTL17Q9H7H0 456 aaPredicted RBP9.05□□□□□ -0.96
HOXA1-201ENST00000343060 ISG20L2Q9H9L3 353 aaKnown RBP9.05□□□□□ -0.96
HOXA1-201ENST00000343060 NANSQ9NR45 359 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 IL20Q9NYY1 176 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 PIPOXQ9P0Z9 390 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 RPS6KB2Q9UBS0 482 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 NPFFR2Q9Y5X5 522 aa9.05□□□□□ -0.96
HOXA1-201ENST00000343060 A0A1B0GUH1 482 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 ANKRD61A6NGH8 418 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 LRRN3E7EW58 273 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 PLPP1O14494 284 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 PLPP2O43688 288 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 ITGA10O75578 1167 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 TBX6O95947 436 aaPredicted RBP9.04□□□□□ -0.96
HOXA1-201ENST00000343060 HRGP04196 525 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 GNSP15586 552 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 CXCL2P19875 107 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 PPP2R1BP30154 601 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 TCTE1Q5JU00 501 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 MPP7Q5T2T1 576 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 SHEQ5VZ18 495 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 B3GNTL1Q67FW5 361 aaPredicted RBP9.04□□□□□ -0.96
HOXA1-201ENST00000343060 FAM180BQ6P0A1 224 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 CDC73Q6P1J9 531 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 CFAP77Q6ZQR2 320 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 LINC00518Q8N0U6 118 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 EIF4E3Q8N5X7 224 aaKnown RBP9.04□□□□□ -0.96
HOXA1-201ENST00000343060 RASGEF1AQ8N9B8 481 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 SMIM4Q8WVI0 70 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 UPF1Q92900 1129 aaKnown RBP eCLIP9.04□□□□□ -0.96
HOXA1-201ENST00000343060 SCAMP4Q969E2 229 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 LMLNQ96KR4 655 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 SLC35G5Q96KT7 338 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 ARHGDIGQ99819 225 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 PELOQ9BRX2 385 aaKnown RBP9.04□□□□□ -0.96
HOXA1-201ENST00000343060 PINK1Q9BXM7 581 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 OR51I1Q9H343 314 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 LRRN3Q9H3W5 708 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 DDX31Q9H8H2 851 aaKnown RBP9.04□□□□□ -0.96
HOXA1-201ENST00000343060 PLEKHA1Q9HB21 404 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms