RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 LRRTM2O43300 516 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 RPL6Q02878 288 aaKnown RBP6.77□□□□□ -1.33
VCAN-202ENST00000342785 KCNJ8Q15842 424 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 SCGB2B2Q4G0G5 96 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 KCTD18Q6PI47 426 aaPredicted RBP6.77□□□□□ -1.33
VCAN-202ENST00000342785 B3GLCTQ6Y288 498 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 ZNF101Q8IZC7 436 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 OR5M3Q8NGP4 307 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 OR2AJ1Q8NGZ0 328 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 ADAMTS19Q8TE59 1207 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 CREB3L4Q8TEY5 395 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 CNN2Q99439 309 aaKnown RBP6.77□□□□□ -1.33
VCAN-202ENST00000342785 GPR174Q9BXC1 333 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 IFT46Q9NQC8 304 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 APOBEC3BQ9UH17 382 aaKnown RBP6.77□□□□□ -1.33
VCAN-202ENST00000342785 BAIAP2Q9UQB8 552 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 PIAS3Q9Y6X2 628 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 MEIOCA2RUB1 952 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 TMX2-CTNND1H3BSU7 103 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 NPC1O15118 1278 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 RBBP9O75884 186 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 AIFM1O95831 613 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 PVRP15151 417 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 DRD5P21918 477 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 ADH7P40394 386 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 POU4F2Q12837 409 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 TSPAN31Q12999 210 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 IRF4Q15306 451 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 PGGHGQ32M88 737 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 PIP5KL1Q5T9C9 394 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 SFRP4Q6FHJ7 346 aaPredicted RBP6.76□□□□□ -1.33
VCAN-202ENST00000342785 DEFB119Q8N690 84 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 OR6T1Q8NGN1 323 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 TMEM163Q8TC26 289 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 NEK7Q8TDX7 302 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 CDS1Q92903 461 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 BPIFA2Q96DR5 249 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 PDXPQ96GD0 296 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 MED16Q9Y2X0 877 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 SPEF1Q9Y4P9 236 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 PCDHGA6Q9Y5G7 932 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 GVINP1Q7Z2Y8 2422 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 GPR89AB7ZAQ6 455 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 PPP1R3DO95685 299 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 GPR89BP0CG08 455 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 ZNF888P0CJ79 500 aaPredicted RBP6.76□□□□□ -1.33
VCAN-202ENST00000342785 KIR2DS3Q14952 304 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 SOWAHCQ53LP3 525 aaPredicted RBP6.76□□□□□ -1.33
VCAN-202ENST00000342785 UBE2UQ5VVX9 321 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 ZC3H14Q6PJT7 736 aaKnown RBP6.76□□□□□ -1.33
VCAN-202ENST00000342785 FAM83HQ6ZRV2 1179 aaPredicted RBP6.76□□□□□ -1.33
VCAN-202ENST00000342785 SPRYD4Q8WW59 207 aaPredicted RBP6.76□□□□□ -1.33
VCAN-202ENST00000342785 RIT1Q92963 219 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 TM4SF18Q96CE8 201 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 OR7D2Q96RA2 312 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 TIMM29Q9BSF4 260 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 PDE7BQ9NP56 450 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 BABAM2Q9NXR7 383 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 TCRBV21S2A2A0A5A6 115 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 OR14I1A6ND48 311 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 FMO6PO60774 539 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 JUNDP17535 347 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 HNRNPA2B1P22626 353 aaKnown RBP6.76□□□□□ -1.33
VCAN-202ENST00000342785 ARRB1P49407 418 aaPredicted RBP6.76□□□□□ -1.33
VCAN-202ENST00000342785 SNRPD2P62316 118 aaKnown RBP6.76□□□□□ -1.33
VCAN-202ENST00000342785 NKX3-2P78367 333 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 FAM78AQ5JUQ0 283 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 TMEM69Q5SWH9 247 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 FCRLBQ6BAA4 426 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 ZNF227Q86WZ6 799 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 PTOV1Q86YD1 416 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 THRSPQ92748 146 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 SAMD11Q96NU1 681 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 SERINC2Q96SA4 455 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 EGLN3Q9H6Z9 239 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 EXO5Q9H790 373 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 SERINC1Q9NRX5 453 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 GPN3Q9UHW5 284 aaPredicted RBP6.76□□□□□ -1.33
VCAN-202ENST00000342785 ENTPD2Q9Y5L3 495 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 A0A1B0GVC2 190 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 A6NIN4 97 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 M0R233 179 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 LCN1P31025 176 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 HOXC8P31273 242 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 MAN2A2P49641 1150 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 PSMA6P60900 246 aaKnown RBP6.76□□□□□ -1.33
VCAN-202ENST00000342785 ACTA2P62736 377 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 ACTG2P63267 376 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 SMCO1Q147U7 214 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 TP53I3Q53FA7 332 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 ZNF559Q9BR84 538 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 SDHAF3Q9NRP4 125 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 A3GALT2U3KPV4 340 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 SCN1AP35498 2009 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 METTL15A6NJ78 407 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 NPIPA5E9PKD4 350 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 PLPP1O14494 284 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 RNF13O43567 381 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 LDB3O75112 727 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 RDH16O75452 317 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms