RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 CCR9P51686 369 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 ARHGAP1Q07960 439 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 NFATC2Q13469 925 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 CDC73Q6P1J9 531 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 LINGO4Q6UY18 593 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 MRGPREQ86SM8 312 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 LHFPL3Q86UP9 236 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 GANCQ8TET4 914 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 SMIM4Q8WVI0 70 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 ZNF285Q96NJ3 590 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 FUZQ9BT04 418 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 BEX1Q9HBH7 125 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 GPBP1L1Q9HC44 474 aaPredicted RBP17.41■□□□□ 0.38
SMPD1-201ENST00000342245 TXNRD2Q9NNW7 524 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 NKIRAS2Q9NYR9 191 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 NTMQ9P121 344 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 KLHL42Q9P2K6 505 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 KLF15Q9UIH9 416 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 PIN4Q9Y237 131 aaKnown RBP17.41■□□□□ 0.38
SMPD1-201ENST00000342245 NPFFR2Q9Y5X5 522 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 NUP214P35658 2090 aaPredicted RBP17.41■□□□□ 0.38
SMPD1-201ENST00000342245 RAB19A4D1S5 217 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 TRAPPC13A5PLN9 417 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 GPR32O75388 356 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 IGHV2-70P01814 119 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 ANKRD34CP0C6C1 535 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 SPP1P10451 314 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 DLX5P56178 289 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 SERTAD2Q14140 314 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 ZNF124Q15973 351 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 MARCH8Q5T0T0 291 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 ZNF626Q68DY1 528 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 OR5M10Q6IEU7 315 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 ADNP2Q6IQ32 1131 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 REEP3Q6NUK4 255 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 ACSM5Q6NUN0 579 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 FBXL22Q6P050 247 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 IL20RBQ6UXL0 311 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 EID2Q8N6I1 236 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 CELF5Q8N6W0 485 aaKnown RBP17.4■□□□□ 0.38
SMPD1-201ENST00000342245 UTP23Q9BRU9 249 aaKnown RBP17.4■□□□□ 0.38
SMPD1-201ENST00000342245 PLEKHA1Q9HB21 404 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 NIT2Q9NQR4 276 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 RASL12Q9NYN1 266 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 ABRACLQ9P1F3 81 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 FBXW2Q9UKT8 454 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 ACAD8Q9UKU7 415 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 EXOGQ9Y2C4 368 aaKnown RBP17.4■□□□□ 0.38
SMPD1-201ENST00000342245 LTBP3Q9NS15 1303 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 LCMT2O60294 686 aaKnown RBP17.4■□□□□ 0.38
SMPD1-201ENST00000342245 REM1O75628 298 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 OR12D1P0DN82 309 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 RPL3P39023 403 aaKnown RBP17.4■□□□□ 0.38
SMPD1-201ENST00000342245 SLC6A12P48065 614 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 DCDP81605 110 aaKnown RBP17.4■□□□□ 0.38
SMPD1-201ENST00000342245 PRAMEF13Q5VWM6 474 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 SMARCD3Q6STE5 483 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 B3GLCTQ6Y288 498 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 SERPINA9Q86WD7 417 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 SORCS1Q8WY21 1168 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 IGSF8Q969P0 613 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 WRAP53Q9BUR4 548 aaKnown RBP17.4■□□□□ 0.38
SMPD1-201ENST00000342245 TM6SF2Q9BZW4 377 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 ELP3Q9H9T3 547 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 ZNF69Q9UC07 566 aa17.4■□□□□ 0.38
SMPD1-201ENST00000342245 HYAL3O43820 417 aaPredicted RBP17.39■□□□□ 0.37
SMPD1-201ENST00000342245 TSPAN3O60637 253 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 IGHA1P01876 353 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 ANXA4P09525 319 aaPredicted RBP17.39■□□□□ 0.37
SMPD1-201ENST00000342245 RPA2P15927 270 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 ZNF3P17036 446 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 ACADLP28330 430 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 KCNJ3P48549 501 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 MECP2P51608 486 aaKnown RBP17.39■□□□□ 0.37
SMPD1-201ENST00000342245 RING1Q06587 406 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 SNTB1Q13884 538 aaKnown RBP17.39■□□□□ 0.37
SMPD1-201ENST00000342245 TCTN3Q6NUS6 607 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 MOB3CQ70IA8 216 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 CIR1Q86X95 450 aaPredicted RBP17.39■□□□□ 0.37
SMPD1-201ENST00000342245 STX12Q86Y82 276 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 SPRYD4Q8WW59 207 aaPredicted RBP17.39■□□□□ 0.37
SMPD1-201ENST00000342245 CMTM3Q96MX0 182 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 MNTQ99583 582 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 BRF2Q9HAW0 419 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 NFKBIL1Q9UBC1 381 aaPredicted RBP17.39■□□□□ 0.37
SMPD1-201ENST00000342245 TIMM13Q9Y5L4 95 aaPredicted RBP17.39■□□□□ 0.37
SMPD1-201ENST00000342245 SLC9B1P1A6NJY1 282 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 ADM5C9JUS6 153 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 SCAMP1O15126 338 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 HEXAP06865 529 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 ALPIP09923 528 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 PRF1P14222 555 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 MAPK9P45984 424 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 HBA1P69905 142 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 DUSP4Q13115 394 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 ENTPD8Q5MY95 495 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 MBOAT1Q6ZNC8 495 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 USP53Q70EK8 1073 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 SLC16A13Q7RTY0 426 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 LDLRAD3Q86YD5 345 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms