RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 GPR151Q8TDV0 419 aa14.03□□□□□ -0.16
VAPA-201ENST00000340541 TESCQ96BS2 214 aa14.03□□□□□ -0.16
VAPA-201ENST00000340541 TEX37Q96LM6 180 aa14.03□□□□□ -0.16
VAPA-201ENST00000340541 TREX2Q9BQ50 279 aaPredicted RBP14.03□□□□□ -0.16
VAPA-201ENST00000340541 RTN4RQ9BZR6 473 aa14.03□□□□□ -0.16
VAPA-201ENST00000340541 DPY30Q9C005 99 aa14.03□□□□□ -0.16
VAPA-201ENST00000340541 LDAHQ9H6V9 325 aa14.03□□□□□ -0.16
VAPA-201ENST00000340541 ZCCHC3Q9NUD5 404 aaKnown RBP14.03□□□□□ -0.16
VAPA-201ENST00000340541 GPATCH2Q9NW75 528 aa14.03□□□□□ -0.16
VAPA-201ENST00000340541 COQ3Q9NZJ6 369 aa14.03□□□□□ -0.16
VAPA-201ENST00000340541 MAPRE3Q9UPY8 281 aa14.03□□□□□ -0.16
VAPA-201ENST00000340541 WIF1Q9Y5W5 379 aa14.03□□□□□ -0.16
VAPA-201ENST00000340541 GPR45Q9Y5Y3 372 aa14.03□□□□□ -0.16
VAPA-201ENST00000340541 PHF3Q92576 2039 aaKnown RBP14.02□□□□□ -0.16
VAPA-201ENST00000340541 BCKDKO14874 412 aa14.02□□□□□ -0.17
VAPA-201ENST00000340541 HMGN2P05204 90 aaKnown RBP14.02□□□□□ -0.17
VAPA-201ENST00000340541 SNRPB2P08579 225 aaKnown RBP14.02□□□□□ -0.17
VAPA-201ENST00000340541 EVI2BP34910 448 aa14.02□□□□□ -0.17
VAPA-201ENST00000340541 KIR3DL1P43629 444 aa14.02□□□□□ -0.17
VAPA-201ENST00000340541 CCT3P49368 545 aaKnown RBP14.02□□□□□ -0.17
VAPA-201ENST00000340541 LSM12Q3MHD2 195 aaKnown RBP14.02□□□□□ -0.17
VAPA-201ENST00000340541 VPS26BQ4G0F5 336 aa14.02□□□□□ -0.17
VAPA-201ENST00000340541 TMEM211Q6ICI0 200 aa14.02□□□□□ -0.17
VAPA-201ENST00000340541 SPATA19Q7Z5L4 167 aa14.02□□□□□ -0.17
VAPA-201ENST00000340541 FAM110BQ8TC76 370 aa14.02□□□□□ -0.17
VAPA-201ENST00000340541 CA5BP1Q8WTZ4 195 aa14.02□□□□□ -0.17
VAPA-201ENST00000340541 SLC9A6Q92581 669 aa14.02□□□□□ -0.17
VAPA-201ENST00000340541 OTUB1Q96FW1 271 aaPredicted RBP14.02□□□□□ -0.17
VAPA-201ENST00000340541 RMND5BQ96G75 393 aaPredicted RBP14.02□□□□□ -0.17
VAPA-201ENST00000340541 C7orf26Q96N11 449 aa14.02□□□□□ -0.17
VAPA-201ENST00000340541 TP63Q9H3D4 680 aaPredicted RBP14.02□□□□□ -0.17
VAPA-201ENST00000340541 NEUROD4Q9HD90 331 aa14.02□□□□□ -0.17
VAPA-201ENST00000340541 SLCO1B3Q9NPD5 702 aa14.02□□□□□ -0.17
VAPA-201ENST00000340541 SERHLQ9NQF3 203 aa14.02□□□□□ -0.17
VAPA-201ENST00000340541 ZNF446Q9NWS9 450 aa14.02□□□□□ -0.17
VAPA-201ENST00000340541 SNX8Q9Y5X2 465 aa14.02□□□□□ -0.17
VAPA-201ENST00000340541 PCNX3Q9H6A9 2034 aa14.02□□□□□ -0.17
VAPA-201ENST00000340541 RNASET2O00584 256 aaKnown RBP14.01□□□□□ -0.17
VAPA-201ENST00000340541 CBR3O75828 277 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 TRAPPC6AO75865 159 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 IL12AP29459 219 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 RIPPLY3P57055 190 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 UFM1P61960 85 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 PPP2R2AP63151 447 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 CRYZQ08257 329 aaKnown RBP14.01□□□□□ -0.17
VAPA-201ENST00000340541 LASP1Q14847 261 aaKnown RBP14.01□□□□□ -0.17
VAPA-201ENST00000340541 CDSNQ15517 529 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 EIPR1Q53HC9 387 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 SPANXN4Q5MJ08 99 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 RTL6Q6ICC9 239 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 APOOLQ6UXV4 268 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 ZAR1Q86SH2 424 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 PLCZ1Q86YW0 608 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 GOLGA6L1Q8N7Z2 621 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 OR56A1Q8NGH5 318 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 OR5M9Q8NGP3 310 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 SFXN5Q8TD22 340 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 ACTRT2Q8TDY3 377 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 SARAFQ96BY9 339 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 OR52B2Q96RD2 323 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 YIPF4Q9BSR8 244 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 EXO5Q9H790 373 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 FBXO34Q9NWN3 711 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 FAM120CQ9NX05 1096 aaKnown RBP14.01□□□□□ -0.17
VAPA-201ENST00000340541 FBXL2Q9UKC9 423 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 MRTO4Q9UKD2 239 aaKnown RBP14.01□□□□□ -0.17
VAPA-201ENST00000340541 ABCG2Q9UNQ0 655 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 FAM215AQ9Y5M1 114 aa14.01□□□□□ -0.17
VAPA-201ENST00000340541 CACNA1CQ13936 2221 aa14□□□□□ -0.17
VAPA-201ENST00000340541 ADGRG4Q8IZF6 3080 aa14□□□□□ -0.17
VAPA-201ENST00000340541 C19orf84I3L1E1 186 aa14□□□□□ -0.17
VAPA-201ENST00000340541 KCNK2O95069 426 aa14□□□□□ -0.17
VAPA-201ENST00000340541 KCNH1O95259 989 aa14□□□□□ -0.17
VAPA-201ENST00000340541 UTS2O95399 124 aa14□□□□□ -0.17
VAPA-201ENST00000340541 ALOX5P09917 674 aa14□□□□□ -0.17
VAPA-201ENST00000340541 RFX3P48380 749 aa14□□□□□ -0.17
VAPA-201ENST00000340541 PRIM2P49643 509 aa14□□□□□ -0.17
VAPA-201ENST00000340541 CLNS1AP54105 237 aaKnown RBP14□□□□□ -0.17
VAPA-201ENST00000340541 PSMD4P55036 377 aaKnown RBP14□□□□□ -0.17
VAPA-201ENST00000340541 NME5P56597 212 aa14□□□□□ -0.17
VAPA-201ENST00000340541 TP53BP2Q13625 1128 aa14□□□□□ -0.17
VAPA-201ENST00000340541 CPEB4Q17RY0 729 aaKnown RBP eCLIP14□□□□□ -0.172e-8■■■■■ 27
VAPA-201ENST00000340541 GRAMD1BQ3KR37 738 aa14□□□□□ -0.17
VAPA-201ENST00000340541 FAM174BQ3ZCQ3 159 aa14□□□□□ -0.17
VAPA-201ENST00000340541 NHSL2Q5HYW2 709 aa14□□□□□ -0.17
VAPA-201ENST00000340541 WIPI1Q5MNZ9 446 aaPredicted RBP14□□□□□ -0.17
VAPA-201ENST00000340541 OR5M10Q6IEU7 315 aa14□□□□□ -0.17
VAPA-201ENST00000340541 CDC73Q6P1J9 531 aa14□□□□□ -0.17
VAPA-201ENST00000340541 EPGNQ6UW88 154 aa14□□□□□ -0.17
VAPA-201ENST00000340541 GALNT10Q86SR1 603 aa14□□□□□ -0.17
VAPA-201ENST00000340541 YRDCQ86U90 279 aaKnown RBP14□□□□□ -0.17
VAPA-201ENST00000340541 ANKRD46Q86W74 232 aa14□□□□□ -0.17
VAPA-201ENST00000340541 FAM83FQ8NEG4 500 aaPredicted RBP14□□□□□ -0.17
VAPA-201ENST00000340541 OR5AK3PQ8NH89 298 aa14□□□□□ -0.17
VAPA-201ENST00000340541 LRRC8CQ8TDW0 803 aa14□□□□□ -0.17
VAPA-201ENST00000340541 ASB5Q8WWX0 329 aa14□□□□□ -0.17
VAPA-201ENST00000340541 STACQ99469 402 aa14□□□□□ -0.17
VAPA-201ENST00000340541 OR2B2Q9GZK3 357 aa14□□□□□ -0.17
VAPA-201ENST00000340541 PIGUQ9H490 435 aa14□□□□□ -0.17
VAPA-201ENST00000340541 SERHL2Q9H4I8 314 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms