RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 NKX2-6A6NCS4 301 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 FAM90A27PA6NNH2 459 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 AHRRA9YTQ3 701 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 UTS2O95399 124 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 C6orf47O95873 294 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 ACTL6AO96019 429 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 HMGN2P05204 90 aaKnown RBP13.28□□□□□ -0.28
ERCC1-203ENST00000340192 SNRPB2P08579 225 aaKnown RBP13.28□□□□□ -0.28
ERCC1-203ENST00000340192 PRF1P14222 555 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 COX6B1P14854 86 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 SRD5A2P31213 254 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 GCKP35557 465 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 KIR3DL1P43629 444 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 CLDN8P56748 225 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 STX5Q13190 355 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 DUSP5Q16690 384 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 GRAMD1BQ3KR37 738 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 LSM12Q3MHD2 195 aaKnown RBP13.28□□□□□ -0.28
ERCC1-203ENST00000340192 ACSF3Q4G176 576 aaPredicted RBP13.28□□□□□ -0.28
ERCC1-203ENST00000340192 EXOSC6Q5RKV6 272 aaKnown RBP13.28□□□□□ -0.28
ERCC1-203ENST00000340192 ZCCHC12Q6PEW1 402 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 CAMKMTQ7Z624 323 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 GALNT10Q86SR1 603 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 MARCH3Q86UD3 253 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 IFNEQ86WN2 208 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 NATD1Q8N6N6 113 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 OTUB1Q96FW1 271 aaPredicted RBP13.28□□□□□ -0.28
ERCC1-203ENST00000340192 WDYHV1Q96HA8 205 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 DUSP26Q9BV47 211 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 RTN4RQ9BZR6 473 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 UCK2Q9BZX2 261 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 CXorf36Q9H7Y0 433 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 MEAF6Q9HAF1 191 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 SDHAF3Q9NRP4 125 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 DKKL1Q9UK85 242 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 PCNX3Q9H6A9 2034 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 MED12Q93074 2177 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 FBN2P35556 2912 aa13.28□□□□□ -0.28
ERCC1-203ENST00000340192 APCP25054 2843 aa13.27□□□□□ -0.28
ERCC1-203ENST00000340192 KDM4EB2RXH2 506 aaPredicted RBP13.27□□□□□ -0.29
ERCC1-203ENST00000340192 FAM47E-STBD1D6RA91 191 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 SNNO75324 88 aaPredicted RBP13.27□□□□□ -0.29
ERCC1-203ENST00000340192 KCNK2O95069 426 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 EPPINO95925 133 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 ALOX5P09917 674 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 LBPP18428 481 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 TCEA1P23193 301 aaKnown RBP13.27□□□□□ -0.29
ERCC1-203ENST00000340192 DPP4P27487 766 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 CCT3P49368 545 aaKnown RBP13.27□□□□□ -0.29
ERCC1-203ENST00000340192 PRIM2P49643 509 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 CLK3P49761 638 aaKnown RBP13.27□□□□□ -0.29
ERCC1-203ENST00000340192 GFRA1P56159 465 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 WNT3P56703 355 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 SPDYE7PQ495Y7 208 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 RIPPLY2Q5TAB7 128 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 SEM1Q6ZVN7 128 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 TRIM42Q8IWZ5 723 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 MCEMP1Q8IX19 187 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 LRRC34Q8IZ02 419 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 FADS6Q8N9I5 356 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 OR4K17Q8NGC6 315 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 RAB3IL1Q8TBN0 382 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 JADE3Q92613 823 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 DTNBP1Q96EV8 351 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 CHMP6Q96FZ7 201 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 TBL1XR1Q9BZK7 514 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 DSN1Q9H410 356 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 RUBCNLQ9H714 662 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 KCNJ16Q9NPI9 418 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 THAP1Q9NVV9 213 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 MED11Q9P086 117 aa13.27□□□□□ -0.29
ERCC1-203ENST00000340192 MRPS18CQ9Y3D5 142 aaKnown RBP13.27□□□□□ -0.29
ERCC1-203ENST00000340192 CFLARO15519 480 aa13.26□□□□□ -0.29
ERCC1-203ENST00000340192 ZIC3O60481 467 aa13.26□□□□□ -0.29
ERCC1-203ENST00000340192 TOXO94900 526 aa13.26□□□□□ -0.29
ERCC1-203ENST00000340192 ZFP36L2P47974 494 aaKnown RBP13.26□□□□□ -0.29
ERCC1-203ENST00000340192 DSCR4P56555 118 aaPredicted RBP13.26□□□□□ -0.29
ERCC1-203ENST00000340192 HBA1P69905 142 aa13.26□□□□□ -0.29
ERCC1-203ENST00000340192 TFF3Q07654 80 aa13.26□□□□□ -0.29
ERCC1-203ENST00000340192 TP53BP2Q13625 1128 aa13.26□□□□□ -0.29
ERCC1-203ENST00000340192 LASP1Q14847 261 aaKnown RBP13.26□□□□□ -0.29
ERCC1-203ENST00000340192 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.26□□□□□ -0.29
ERCC1-203ENST00000340192 ATG16L1Q676U5 607 aa13.26□□□□□ -0.29
ERCC1-203ENST00000340192 OR4F3Q6IEY1 312 aa13.26□□□□□ -0.29
ERCC1-203ENST00000340192 FIGNL1Q6PIW4 674 aa13.26□□□□□ -0.29
ERCC1-203ENST00000340192 APOOLQ6UXV4 268 aa13.26□□□□□ -0.29
ERCC1-203ENST00000340192 ZAR1Q86SH2 424 aa13.26□□□□□ -0.29
ERCC1-203ENST00000340192 LACC1Q8IV20 430 aa13.26□□□□□ -0.29
ERCC1-203ENST00000340192 COX18Q8N8Q8 333 aa13.26□□□□□ -0.29
ERCC1-203ENST00000340192 TNIP2Q8NFZ5 429 aa13.26□□□□□ -0.29
ERCC1-203ENST00000340192 OR2M3Q8NG83 312 aa13.26□□□□□ -0.29
ERCC1-203ENST00000340192 OR56A1Q8NGH5 318 aa13.26□□□□□ -0.29
ERCC1-203ENST00000340192 OR5AK3PQ8NH89 298 aa13.26□□□□□ -0.29
ERCC1-203ENST00000340192 FAM110BQ8TC76 370 aa13.26□□□□□ -0.29
ERCC1-203ENST00000340192 SFXN5Q8TD22 340 aa13.26□□□□□ -0.29
ERCC1-203ENST00000340192 DUSP19Q8WTR2 217 aa13.26□□□□□ -0.29
ERCC1-203ENST00000340192 CDS1Q92903 461 aa13.26□□□□□ -0.29
ERCC1-203ENST00000340192 DPY30Q9C005 99 aa13.26□□□□□ -0.29
ERCC1-203ENST00000340192 MANSC1Q9H8J5 431 aa13.26□□□□□ -0.29
ERCC1-203ENST00000340192 NEUROD4Q9HD90 331 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms