RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 GCNT6Q5T4J0 391 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 DCAF12L1Q5VU92 463 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 FAM69BQ5VUD6 431 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 SLC27A4Q6P1M0 643 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 MED27Q6P2C8 311 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 FAM171BQ6P995 826 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 LRRC28Q86X40 367 aaPredicted RBP3.12□□□□□ -1.91
CSMD3-202ENST00000339701 ARMC10Q8N2F6 343 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 SUMF1Q8NBK3 374 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 OR56B2PQ8NGI1 322 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 OR2L8Q8NGY9 312 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 SPATA20Q8TB22 786 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 CPT1CQ8TCG5 803 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 NAT14Q8WUY8 206 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 POM121Q96HA1 1249 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 GAL3ST4Q96RP7 486 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 NIPSNAP3BQ9BS92 247 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 TM6SF2Q9BZW4 377 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 RIMS4Q9H426 269 aaPredicted RBP3.12□□□□□ -1.91
CSMD3-202ENST00000339701 DNAJC18Q9H819 358 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF222Q9UK12 451 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 A0A075B6Q4 140 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 A0A0U1RQF3 1178 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF670-ZNF695F2Z2N8 137 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 C17orf112F2Z3M2 114 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 TNFSF14O43557 240 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 KLRC4O43908 158 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 FHP07954 510 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 HOXD12P35452 270 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 DAOAP59103 153 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 IL10RBQ08334 325 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 DSC1Q08554 894 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 FOXD4Q12950 439 aaPredicted RBP3.12□□□□□ -1.91
CSMD3-202ENST00000339701 TRAM2Q15035 370 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 FAM209AQ5JX71 171 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 STPG1Q5TH74 334 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 GPR157Q5UAW9 335 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 PRAMEF13Q5VWM6 474 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 LPCAT4Q643R3 524 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 DUPD1Q68J44 220 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 ANKK1Q8NFD2 765 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 STEAP2Q8NFT2 490 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 IL4I1Q96RQ9 567 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 WDR24Q96S15 920 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 UBL7Q96S82 380 aaPredicted RBP3.12□□□□□ -1.91
CSMD3-202ENST00000339701 SULT4A1Q9BR01 284 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 OR51B5Q9H339 312 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 RGCCQ9H4X1 137 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 SCPEP1Q9HB40 452 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 PDLIM7Q9NR12 457 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 RNF19AQ9NV58 838 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 PRSS51A0A1B0GVH4 220 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 PLRG1O43660 514 aaKnown RBP3.12□□□□□ -1.91
CSMD3-202ENST00000339701 LRP3O75074 770 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 BEST1O76090 585 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 MT-ND1P03886 318 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 CHRM5P08912 532 aaPredicted RBP3.12□□□□□ -1.91
CSMD3-202ENST00000339701 BMP6P22004 513 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 HNRNPA2B1P22626 353 aaKnown RBP3.12□□□□□ -1.91
CSMD3-202ENST00000339701 RPS27AP62979 156 aaKnown RBP3.12□□□□□ -1.91
CSMD3-202ENST00000339701 UBA52P62987 128 aaKnown RBP3.12□□□□□ -1.91
CSMD3-202ENST00000339701 CDKL1Q00532 357 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 TPBGQ13641 420 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 FCRL6Q6DN72 434 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 ARSKQ6UWY0 536 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 PRSS48Q7RTY5 328 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 MRPL10Q7Z7H8 261 aaKnown RBP3.12□□□□□ -1.91
CSMD3-202ENST00000339701 SLC34A3Q8N130 599 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF615Q8N8J6 731 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 ACBD4Q8NC06 268 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 OR9A2Q8NGT5 310 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 OR4L1Q8NH43 312 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 SLC25A36Q96CQ1 311 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 MAP6Q96JE9 813 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 SERINC2Q96SA4 455 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 TIMM29Q9BSF4 260 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 CTPS2Q9NRF8 586 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 DECR2Q9NUI1 292 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 RLIMQ9NVW2 624 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 KLHL21Q9UJP4 597 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 SRPK3Q9UPE1 567 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 CADP27708 2225 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 KIF26BQ2KJY2 2108 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 CCDC187A0A096LP49 1063 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 FAM166BA8MTA8 275 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 ALG1L2C9J202 215 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 E9PAM4 449 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 ALDOBP05062 364 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 ITGB2P05107 769 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 HOXC13P31276 330 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 ETV4P43268 484 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 NOVP48745 357 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 DNASE1L1P49184 302 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 CXCR3P49682 368 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 SULT1A2P50226 295 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF84P51523 738 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 HTRA4P83105 476 aaPredicted RBP3.12□□□□□ -1.91
CSMD3-202ENST00000339701 DAG1Q14118 895 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF460Q14592 562 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 SSX2Q16385 188 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms