RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 RFX3P48380 749 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 TDGF1P3P51864 188 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 SMIM11AP58511 58 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 TTLL9Q3SXZ7 439 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 NADSYN1Q6IA69 706 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 WDR73Q6P4I2 378 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 ZNF613Q6PF04 617 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 C16orf59Q7L2K0 433 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 KIAA0907Q7Z7F0 614 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-201ENST00000338963 ZNF573Q86YE8 665 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 BTF3L4Q96K17 158 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 SOSTQ9BQB4 213 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 RTP3Q9BQQ7 232 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 RGCCQ9H4X1 137 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 WDCPQ9H6R7 721 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 TPT1P8Q9HAU6 139 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 TMEFF2Q9UIK5 374 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-201ENST00000338963 MRPS18CQ9Y3D5 142 aaKnown RBP3.92□□□□□ -1.78
NEDD4-201ENST00000338963 ATG4BQ9Y4P1 393 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 K7EP13 123 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 MASP2O00187 686 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 NARSO43776 548 aaKnown RBP3.92□□□□□ -1.78
NEDD4-201ENST00000338963 CYTIPO60759 359 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 ADRB2P07550 413 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 IL3P08700 152 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 C6P13671 934 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 IGFALSP35858 605 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 DGKGP49619 791 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 ZBTB6Q15916 424 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 GSG1Q2KHT4 349 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 SCGB2B2Q4G0G5 96 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 COL5A1-AS1Q5SY13 56 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 ZFP82Q8N141 532 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 OR8J1Q8NGP2 316 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 DCAF5Q96JK2 942 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 KREMEN1Q96MU8 473 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 CWH43Q9H720 699 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 UQCC1Q9NVA1 299 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 CAMK2AQ9UQM7 478 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 SLC27A6Q9Y2P4 619 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 WIF1Q9Y5W5 379 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 PUS1Q9Y606 427 aaKnown RBP eCLIP3.92□□□□□ -1.78
NEDD4-201ENST00000338963 C5orf51A6NDU8 294 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 ANHXE9PGG2 379 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 ARPC5O15511 151 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 DRD2P14416 443 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 GPD1P21695 349 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 OTX1P32242 354 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-201ENST00000338963 CCR1P32246 355 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 BDH1Q02338 343 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 TSPAN31Q12999 210 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 SNTB2Q13425 540 aaKnown RBP3.92□□□□□ -1.78
NEDD4-201ENST00000338963 PPIGQ13427 754 aaKnown RBP eCLIP3.92□□□□□ -1.78
NEDD4-201ENST00000338963 SEZ6Q53EL9 994 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 CRTC2Q53ET0 693 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-201ENST00000338963 ACSM5Q6NUN0 579 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 GLDNQ6ZMI3 551 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-201ENST00000338963 DET1Q7L5Y6 550 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 ZNF551Q7Z340 670 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-201ENST00000338963 NPAS4Q8IUM7 802 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 CDAN1Q8IWY9 1227 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 CPXM2Q8N436 756 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 LINC00471Q8N535 108 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 PIGXQ8TBF5 258 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 SLC35F5Q8WV83 523 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 TAPBPLQ9BX59 468 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 TKTL2Q9H0I9 626 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 ZFYVE1Q9HBF4 777 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 PLSCR2Q9NRY7 297 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 KLHL11Q9NVR0 708 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 TCRBV7S3A2A0A539 114 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 FAM171A2A8MVW0 826 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 MFNGO00587 321 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 OGG1O15527 345 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 SIAH2O43255 324 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 OR2A4O95047 310 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 TRUB2O95900 331 aaKnown RBP3.92□□□□□ -1.78
NEDD4-201ENST00000338963 OR8U8P0C7N1 319 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 PTGER2P43116 358 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 RENBPP51606 427 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 SHC2P98077 582 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 IQCJQ1A5X6 159 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 PTCHD3Q3KNS1 767 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 CPZQ66K79 652 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 SLC30A6Q6NXT4 461 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 RPL22L1Q6P5R6 122 aaKnown RBP3.92□□□□□ -1.78
NEDD4-201ENST00000338963 SLC41A1Q8IVJ1 513 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 TNS4Q8IZW8 715 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 OR11H7Q8NGC8 314 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 CD300LFQ8TDQ1 290 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 TWIST2Q8WVJ9 160 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 DNASE1L2Q92874 299 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 OR2A7Q96R45 310 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 DDOQ99489 341 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 PIGQQ9BRB3 760 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 ZNF471Q9BX82 626 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-201ENST00000338963 CHST5Q9GZS9 411 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 ASF1BQ9NVP2 202 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 ABRACLQ9P1F3 81 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 MRPL42Q9Y6G3 142 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms