RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 RLIMQ9NVW2 624 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 RHCGQ9UBD6 479 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 C19orf25Q9UFG5 118 aaPredicted RBP13.6□□□□□ -0.23
CBX3-201ENST00000337620 RIF1Q5UIP0 2472 aaKnown RBP13.6□□□□□ -0.23
CBX3-201ENST00000337620 SAGE2PA6NJ88 616 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 ADAMDEC1O15204 470 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 SEC24DO94855 1032 aaPredicted RBP13.6□□□□□ -0.23
CBX3-201ENST00000337620 DBIP07108 87 aaKnown RBP13.6□□□□□ -0.23
CBX3-201ENST00000337620 RHCEP18577 417 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 CDH12P55289 794 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 PAPD4Q6PIY7 484 aaKnown RBP13.6□□□□□ -0.23
CBX3-201ENST00000337620 TMEM205Q6UW68 189 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 ASCL5Q7RTU5 278 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 TIPARPQ7Z3E1 657 aaKnown RBP13.6□□□□□ -0.23
CBX3-201ENST00000337620 HIPK1Q86Z02 1210 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 B3GNT7Q8NFL0 401 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 LCORQ96JN0 433 aaPredicted RBP13.6□□□□□ -0.23
CBX3-201ENST00000337620 LPAR4Q99677 370 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 PIP5K1AQ99755 562 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 G6PC3Q9BUM1 346 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 NRSN2Q9GZP1 204 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 KLHL28Q9NXS3 571 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 KCNE5Q9UJ90 142 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 KNTC1P50748 2209 aa13.59□□□□□ -0.23
CBX3-201ENST00000337620 CDC14CA4D256 554 aa13.59□□□□□ -0.23
CBX3-201ENST00000337620 TNFRSF11BO00300 401 aa13.59□□□□□ -0.23
CBX3-201ENST00000337620 FRS3O43559 492 aa13.59□□□□□ -0.23
CBX3-201ENST00000337620 UGT2B17O75795 530 aa13.59□□□□□ -0.23
CBX3-201ENST00000337620 KLF7O75840 302 aaPredicted RBP13.59□□□□□ -0.23
CBX3-201ENST00000337620 DNAJB5O75953 348 aa13.59□□□□□ -0.23
CBX3-201ENST00000337620 GPR143P51810 404 aa13.59□□□□□ -0.23
CBX3-201ENST00000337620 TARDBPQ13148 414 aaKnown RBP eCLIP13.59□□□□□ -0.233e-12■□□□□ 10.3
CBX3-201ENST00000337620 EBPQ15125 230 aaKnown RBP13.59□□□□□ -0.23
CBX3-201ENST00000337620 TCTN3Q6NUS6 607 aa13.59□□□□□ -0.23
CBX3-201ENST00000337620 SHQ1Q6PI26 577 aaKnown RBP13.59□□□□□ -0.23
CBX3-201ENST00000337620 DHRS4L2Q6PKH6 230 aa13.59□□□□□ -0.23
CBX3-201ENST00000337620 ZNF836Q6ZNA1 936 aa13.59□□□□□ -0.23
CBX3-201ENST00000337620 CYP4Z1Q86W10 505 aa13.59□□□□□ -0.23
CBX3-201ENST00000337620 ZNF614Q8N883 585 aa13.59□□□□□ -0.23
CBX3-201ENST00000337620 ZSCAN1Q8NBB4 408 aa13.59□□□□□ -0.23
CBX3-201ENST00000337620 OR6T1Q8NGN1 323 aa13.59□□□□□ -0.23
CBX3-201ENST00000337620 ADIPOR1Q96A54 375 aa13.59□□□□□ -0.23
CBX3-201ENST00000337620 ZNF597Q96LX8 424 aa13.59□□□□□ -0.23
CBX3-201ENST00000337620 LMF1Q96S06 567 aa13.59□□□□□ -0.23
CBX3-201ENST00000337620 BARD1Q99728 777 aaKnown RBP13.59□□□□□ -0.23
CBX3-201ENST00000337620 WWTR1Q9GZV5 400 aa13.59□□□□□ -0.23
CBX3-201ENST00000337620 SMURF2Q9HAU4 748 aa13.59□□□□□ -0.23
CBX3-201ENST00000337620 C8orf4Q9NR00 106 aa13.59□□□□□ -0.23
CBX3-201ENST00000337620 FOXJ2Q9P0K8 574 aa13.59□□□□□ -0.23
CBX3-201ENST00000337620 CHST2Q9Y4C5 530 aa13.59□□□□□ -0.23
CBX3-201ENST00000337620 PCDHGA3Q9Y5H0 932 aa13.59□□□□□ -0.23
CBX3-201ENST00000337620 H0YJX3 145 aa13.58□□□□□ -0.23
CBX3-201ENST00000337620 SYT5O00445 386 aa13.58□□□□□ -0.23
CBX3-201ENST00000337620 DPM1O60762 260 aa13.58□□□□□ -0.23
CBX3-201ENST00000337620 UMODP07911 640 aa13.58□□□□□ -0.23
CBX3-201ENST00000337620 THBS1P07996 1170 aa13.58□□□□□ -0.23
CBX3-201ENST00000337620 ACADSP16219 412 aa13.58□□□□□ -0.23
CBX3-201ENST00000337620 TCN2P20062 427 aa13.58□□□□□ -0.23
CBX3-201ENST00000337620 FPR1P21462 350 aa13.58□□□□□ -0.23
CBX3-201ENST00000337620 DRD5P21918 477 aa13.58□□□□□ -0.23
CBX3-201ENST00000337620 NR0B1P51843 470 aaKnown RBP13.58□□□□□ -0.23
CBX3-201ENST00000337620 DCAF7P61962 342 aa13.58□□□□□ -0.23
CBX3-201ENST00000337620 DAG1Q14118 895 aa13.58□□□□□ -0.23
CBX3-201ENST00000337620 DECR1Q16698 335 aa13.58□□□□□ -0.23
CBX3-201ENST00000337620 LIN52Q52LA3 116 aa13.58□□□□□ -0.23
CBX3-201ENST00000337620 NFAM1Q8NET5 270 aaPredicted RBP13.58□□□□□ -0.23
CBX3-201ENST00000337620 PMM1Q92871 262 aa13.58□□□□□ -0.23
CBX3-201ENST00000337620 EFHD2Q96C19 240 aaPredicted RBP13.58□□□□□ -0.23
CBX3-201ENST00000337620 NAF1Q96HR8 494 aaKnown RBP13.58□□□□□ -0.23
CBX3-201ENST00000337620 EPYCQ99645 322 aa13.58□□□□□ -0.23
CBX3-201ENST00000337620 WDR77Q9BQA1 342 aaPredicted RBP13.58□□□□□ -0.23
CBX3-201ENST00000337620 PDP1Q9P0J1 537 aaPredicted RBP13.58□□□□□ -0.23
CBX3-201ENST00000337620 FRG2CA6NGY1 282 aa13.58□□□□□ -0.24
CBX3-201ENST00000337620 OR6C76A6NM76 312 aa13.58□□□□□ -0.24
CBX3-201ENST00000337620 PROB1E7EW31 1015 aa13.58□□□□□ -0.24
CBX3-201ENST00000337620 FFAR1O14842 300 aa13.58□□□□□ -0.24
CBX3-201ENST00000337620 SEMA7AO75326 666 aa13.58□□□□□ -0.24
CBX3-201ENST00000337620 TNFSF15O95150 251 aa13.58□□□□□ -0.24
CBX3-201ENST00000337620 DLGAP3O95886 979 aa13.58□□□□□ -0.24
CBX3-201ENST00000337620 CYC1P08574 325 aa13.58□□□□□ -0.24
CBX3-201ENST00000337620 NID1P14543 1247 aa13.58□□□□□ -0.24
CBX3-201ENST00000337620 UQCRBP14927 111 aa13.58□□□□□ -0.24
CBX3-201ENST00000337620 RPS4Y1P22090 263 aaKnown RBP13.58□□□□□ -0.24
CBX3-201ENST00000337620 HSPA13P48723 471 aa13.58□□□□□ -0.24
CBX3-201ENST00000337620 ALDH3A2P51648 485 aa13.58□□□□□ -0.24
CBX3-201ENST00000337620 LIMK1P53667 647 aa13.58□□□□□ -0.24
CBX3-201ENST00000337620 PDZK1Q5T2W1 519 aa13.58□□□□□ -0.24
CBX3-201ENST00000337620 C6orf52Q5T4I8 152 aa13.58□□□□□ -0.24
CBX3-201ENST00000337620 WLSQ5T9L3 541 aa13.58□□□□□ -0.24
CBX3-201ENST00000337620 ANKRD34AQ69YU3 496 aa13.58□□□□□ -0.24
CBX3-201ENST00000337620 MARCH9Q86YJ5 346 aa13.58□□□□□ -0.24
CBX3-201ENST00000337620 PRR22Q8IZ63 422 aa13.58□□□□□ -0.24
CBX3-201ENST00000337620 APCDD1LQ8NCL9 501 aa13.58□□□□□ -0.24
CBX3-201ENST00000337620 OR2Y1Q8NGV0 311 aa13.58□□□□□ -0.24
CBX3-201ENST00000337620 ARHGDIGQ99819 225 aa13.58□□□□□ -0.24
CBX3-201ENST00000337620 LIN28AQ9H9Z2 209 aaKnown RBP13.58□□□□□ -0.24
CBX3-201ENST00000337620 LYVE1Q9Y5Y7 322 aa13.58□□□□□ -0.24
CBX3-201ENST00000337620 DKK1O94907 266 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 GADD45GO95257 159 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 FUT4P22083 530 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms