RNA–Protein interactions for RNA: ENST00000333628.3

TUBB2A-201, Transcript of tubulin beta 2A class IIa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB2A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB2A-201ENST00000333628 LAMP1P11279 417 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 OTX2P32243 289 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 ST13P50502 369 aaKnown RBP12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 EFNA3P52797 238 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 RAB38P57729 211 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 SELENOWP63302 87 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 ZNF763Q0D2J5 394 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 LY6DQ14210 128 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 MAD2L1BPQ15013 274 aaPredicted RBP12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 CTF1Q16619 201 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 TBR1Q16650 682 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 CRTC2Q53ET0 693 aaPredicted RBP12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 MFSD4BQ5TF39 518 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 C16orf87Q6PH81 154 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 IKBIPQ70UQ0 350 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 MED25Q71SY5 747 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 CCDC80Q76M96 950 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 COMMD6Q7Z4G1 85 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 NUDT13Q86X67 352 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 C1orf52Q8N6N3 182 aaKnown RBP12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 ADAMTS17Q8TE56 1095 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 CHPT1Q8WUD6 406 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 HSPBAP1Q96EW2 488 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 HRASLS5Q96KN8 279 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 C7orf34Q96L11 122 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 EBPLQ9BY08 206 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 RIBC2Q9H4K1 309 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 TMEM38AQ9H6F2 299 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 REEP4Q9H6H4 257 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 SEMA3GQ9NS98 782 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 PLCXD1Q9NUJ7 323 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 GIN1Q9NXP7 522 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 PDP1Q9P0J1 537 aaPredicted RBP12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 ADAM29Q9UKF5 820 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 ASB4Q9Y574 426 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 U3KQV3 271 aa12.52□□□□□ -0.4
TUBB2A-201ENST00000333628 CDC14CA4D256 554 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 MYO1GB0I1T2 1018 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 CLDN25C9JDP6 229 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 CYR61O00622 381 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 ATXN7O15265 892 aaPredicted RBP12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 TMPRSS11DO60235 418 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 CDC123O75794 336 aaPredicted RBP12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 CPSF4O95639 269 aaKnown RBP12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 ANXA8P13928 327 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 CD247P20963 164 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 MMP11P24347 488 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 TPP2P29144 1249 aaPredicted RBP12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 CLK3P49761 638 aaKnown RBP12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 GP2P55259 537 aaKnown RBP12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 RAE1P78406 368 aaKnown RBP12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 BTG2P78543 158 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 VLDLRP98155 873 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 NPRL3Q12980 569 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 PDE7AQ13946 482 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 NPTX1Q15818 432 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 DGUOKQ16854 277 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 MINDY4Q4G0A6 757 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 IQCCQ4KMZ1 466 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 FAAH2Q6GMR7 532 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 MRM1Q6IN84 353 aaKnown RBP12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 PAGE2Q7Z2X7 111 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 ATG16L2Q8NAA4 619 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 GIPC3Q8TF64 312 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 CSF3RQ99062 836 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 PSD2Q9BQI7 771 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 VN1R1Q9GZP7 353 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 PAK1IP1Q9NWT1 392 aaPredicted RBP12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 THUMPD1Q9NXG2 353 aaKnown RBP12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 VNN3Q9NY84 501 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 FBXW2Q9UKT8 454 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 PCDHGA10Q9Y5H3 936 aa12.52□□□□□ -0.41
TUBB2A-201ENST00000333628 PCSK5Q92824 1860 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 CLDN24A6NM45 220 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 PTGES3LE9PB15 166 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 PROM1O43490 865 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 ZIC2O95409 532 aaPredicted RBP12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 IGHEP01854 428 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 PRB1P04280 392 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 ITGB2P05107 769 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 CPN2P22792 545 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 KCNJ10P78508 379 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 RHAGQ02094 409 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 ZNF630Q2M218 657 aaPredicted RBP12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 DEFB109BQ30KR1 87 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 PPP1R32Q7Z5V6 425 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 EXD3Q8N9H8 876 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 TMEM52Q8NDY8 209 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 PLPP5Q8NEB5 264 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 OR52N2Q8NGI0 321 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 NACC2Q96BF6 587 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 YIPF6Q96EC8 236 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 MESP1Q9BRJ9 268 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 SEMA4CQ9C0C4 833 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 CCDC90BQ9GZT6 254 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 MYNNQ9NPC7 610 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 MS4A12Q9NXJ0 267 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 ERGIC3Q9Y282 383 aa12.51□□□□□ -0.41
TUBB2A-201ENST00000333628 ATG4BQ9Y4P1 393 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms