RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 PRICKLE3O43900 615 aaPredicted RBP8.41□□□□□ -1.06
COPB2-201ENST00000333188 WBP4O75554 376 aaKnown RBP8.41□□□□□ -1.06
COPB2-201ENST00000333188 HPRP00739 348 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 RNH1P13489 461 aaKnown RBP8.41□□□□□ -1.06
COPB2-201ENST00000333188 MAGEA2P43356 314 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 ARRB1P49407 418 aaPredicted RBP8.41□□□□□ -1.06
COPB2-201ENST00000333188 CLDN6P56747 220 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 RACK1P63244 317 aaKnown RBP8.41□□□□□ -1.06
COPB2-201ENST00000333188 LSAMPQ13449 338 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 AP1ARQ63HQ0 302 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 CAMKK1Q8N5S9 505 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 ZNF563Q8TA94 476 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 GATAD2BQ8WXI9 593 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 SAMD8Q96LT4 415 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 MS4A4EQ96PG1 132 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 POLR2J2Q9GZM3 115 aaKnown RBP8.41□□□□□ -1.06
COPB2-201ENST00000333188 CHST8Q9H2A9 424 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 ABCB10Q9NRK6 738 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 ERGIC3Q9Y282 383 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 RNF215Q9Y6U7 377 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 PCDH15Q96QU1 1955 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 OR5K4A6NMS3 321 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 EFCAB9A8MZ26 197 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 MAGEB4O15481 346 aaPredicted RBP8.41□□□□□ -1.06
COPB2-201ENST00000333188 CDC40O60508 579 aaKnown RBP eCLIP8.41□□□□□ -1.06
COPB2-201ENST00000333188 GALR3O60755 368 aaPredicted RBP8.41□□□□□ -1.06
COPB2-201ENST00000333188 ACP2P11117 423 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 BMP7P18075 431 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 GADD45AP24522 165 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 SERPINB1P30740 379 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 TGM4P49221 684 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 COPZ1P61923 177 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 TUBA4AP68366 448 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 POU6F2P78424 691 aaPredicted RBP8.41□□□□□ -1.06
COPB2-201ENST00000333188 PCDH1Q08174 1060 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 FUT5Q11128 374 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 GNA13Q14344 377 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 FXNQ16595 210 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 NDUFA9Q16795 377 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 USP51Q70EK9 711 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 DEPDC4Q8N2C3 294 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 OR51G2Q8NGK0 314 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 OR9Q1Q8NGQ5 310 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 SLC25A36Q96CQ1 311 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 CEP19Q96LK0 163 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 EPYCQ99645 322 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 NDC1Q9BTX1 674 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 GTF2A1LQ9UNN4 478 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 TMEM184BQ9Y519 407 aaPredicted RBP8.41□□□□□ -1.06
COPB2-201ENST00000333188 SLC22A7Q9Y694 548 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 PRKYO43930 277 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 KCNJ13O60928 360 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 STX11O75558 287 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 LIPAP38571 399 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 GP2P55259 537 aaKnown RBP8.41□□□□□ -1.06
COPB2-201ENST00000333188 CRYZQ08257 329 aaKnown RBP8.41□□□□□ -1.06
COPB2-201ENST00000333188 NFATC3Q12968 1075 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 ODF4Q2M2E3 257 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 ZC3H12BQ5HYM0 836 aaKnown RBP8.41□□□□□ -1.06
COPB2-201ENST00000333188 GTF2IRD2BQ6EKJ0 949 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 GTF2IRD2Q86UP8 949 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 GOT1L1Q8NHS2 421 aaPredicted RBP8.41□□□□□ -1.06
COPB2-201ENST00000333188 PIGXQ8TBF5 258 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 ZNF675Q8TD23 568 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 MYDGFQ969H8 173 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 SLC41A3Q96GZ6 507 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 SDF2Q99470 211 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 ZNF559Q9BR84 538 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 ZNF639Q9UID6 485 aa8.41□□□□□ -1.06
COPB2-201ENST00000333188 AHCYP23526 432 aa8.4□□□□□ -1.06
COPB2-201ENST00000333188 GGT2P36268 569 aa8.4□□□□□ -1.06
COPB2-201ENST00000333188 ALDH3B2P48448 385 aa8.4□□□□□ -1.06
COPB2-201ENST00000333188 ST3GAL3Q11203 375 aa8.4□□□□□ -1.06
COPB2-201ENST00000333188 INAVAQ3KP66 663 aa8.4□□□□□ -1.06
COPB2-201ENST00000333188 XAF1Q6GPH4 301 aa8.4□□□□□ -1.06
COPB2-201ENST00000333188 PGBD2Q6P3X8 592 aa8.4□□□□□ -1.06
COPB2-201ENST00000333188 RNF165Q6ZSG1 346 aa8.4□□□□□ -1.06
COPB2-201ENST00000333188 ARHGAP22Q7Z5H3 698 aa8.4□□□□□ -1.06
COPB2-201ENST00000333188 SLC35F3Q8IY50 421 aa8.4□□□□□ -1.06
COPB2-201ENST00000333188 CDK20Q8IZL9 346 aa8.4□□□□□ -1.06
COPB2-201ENST00000333188 CA13Q8N1Q1 262 aa8.4□□□□□ -1.06
COPB2-201ENST00000333188 OR4F15Q8NGB8 312 aa8.4□□□□□ -1.06
COPB2-201ENST00000333188 SEMA6CQ9H3T2 930 aa8.4□□□□□ -1.06
COPB2-201ENST00000333188 C8orf4Q9NR00 106 aa8.4□□□□□ -1.06
COPB2-201ENST00000333188 SNTG1Q9NSN8 517 aa8.4□□□□□ -1.06
COPB2-201ENST00000333188 MALT1Q9UDY8 824 aa8.4□□□□□ -1.06
COPB2-201ENST00000333188 ADAM29Q9UKF5 820 aa8.4□□□□□ -1.06
COPB2-201ENST00000333188 NDRG4Q9ULP0 352 aaKnown RBP8.4□□□□□ -1.06
COPB2-201ENST00000333188 CSF2P04141 144 aa8.4□□□□□ -1.07
COPB2-201ENST00000333188 FOLR1P15328 257 aa8.4□□□□□ -1.07
COPB2-201ENST00000333188 MYL12AP19105 171 aa8.4□□□□□ -1.07
COPB2-201ENST00000333188 CD1CP29017 333 aa8.4□□□□□ -1.07
COPB2-201ENST00000333188 GCGRP47871 477 aa8.4□□□□□ -1.07
COPB2-201ENST00000333188 AFF3P51826 1226 aaKnown RBP8.4□□□□□ -1.07
COPB2-201ENST00000333188 NR0B1P51843 470 aaKnown RBP8.4□□□□□ -1.07
COPB2-201ENST00000333188 PCBP3P57721 371 aaKnown RBP8.4□□□□□ -1.07
COPB2-201ENST00000333188 EEF1A2Q05639 463 aaKnown RBP8.4□□□□□ -1.07
COPB2-201ENST00000333188 NR1D2Q14995 579 aa8.4□□□□□ -1.07
COPB2-201ENST00000333188 ZNF791Q3KP31 576 aaPredicted RBP8.4□□□□□ -1.07
COPB2-201ENST00000333188 PLBD1Q6P4A8 553 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms