RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 Q3ZCU0 254 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 FAM180BQ6P0A1 224 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 CD200R1LQ6Q8B3 271 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 MEX3DQ86XN8 651 aaKnown RBP17.05■□□□□ 0.32
PKP3-201ENST00000331563 APCDD1Q8J025 514 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 MRPS31Q92665 395 aaKnown RBP17.05■□□□□ 0.32
PKP3-201ENST00000331563 SLC12A9Q9BXP2 914 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 KCND3Q9UK17 655 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 DTX4Q9Y2E6 619 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 EXOSC1Q9Y3B2 195 aaKnown RBP17.05■□□□□ 0.32
PKP3-201ENST00000331563 TCRBV16S1A1N1A0A5B0 115 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 FAM74A7A6NL05 159 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 DVL2O14641 736 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 PDCD5O14737 125 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 GNB5O14775 395 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 CASC3O15234 703 aaKnown RBP17.05■□□□□ 0.32
PKP3-201ENST00000331563 SELENOFO60613 162 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 ECDO95905 644 aaPredicted RBP17.05■□□□□ 0.32
PKP3-201ENST00000331563 BCHEP06276 602 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 HSD17B2P37059 387 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 SLC6A12P48065 614 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 RAB13P51153 203 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 DSG2Q14126 1118 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 FAM74A3Q4VXF1 159 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 NCEH1Q6PIU2 408 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 MYLIPQ8WY64 445 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 ACOT12Q8WYK0 555 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 CHFRQ96EP1 664 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 ELMOD3Q96FG2 381 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 C11orf49Q9H6J7 331 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 CYSLTR2Q9NS75 346 aa17.05■□□□□ 0.32
PKP3-201ENST00000331563 L7N2F9 121 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 RECKO95980 971 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 FGF2P09038 288 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 LIMS3P0CW19 117 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 LIMS4P0CW20 117 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 SULT1A3P0DMM9 295 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 SULT1A4P0DMN0 295 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 PEPDP12955 493 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 SELENOPP49908 381 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 EEF1A2Q05639 463 aaKnown RBP17.04■□□□□ 0.32
PKP3-201ENST00000331563 GSG1Q2KHT4 349 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 MPEG1Q2M385 716 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 TCTE1Q5JU00 501 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 REEP3Q6NUK4 255 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 TCTN3Q6NUS6 607 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 ZNF687Q8N1G0 1237 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 SLC7A13Q8TCU3 470 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 PLD4Q96BZ4 506 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 PPCDCQ96CD2 204 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 ART5Q96L15 291 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 ABHD1Q96SE0 405 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 POMT2Q9UKY4 750 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 KCNK7Q9Y2U2 307 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 HIDE1A8MVS5 230 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 SAP18O00422 153 aaKnown RBP17.04■□□□□ 0.32
PKP3-201ENST00000331563 CCL16O15467 120 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 SMAD6O43541 496 aaKnown RBP17.04■□□□□ 0.32
PKP3-201ENST00000331563 SRPRAP08240 638 aaKnown RBP17.04■□□□□ 0.32
PKP3-201ENST00000331563 TNFAIP8L2Q6P589 184 aaPredicted RBP17.04■□□□□ 0.32
PKP3-201ENST00000331563 FAM198BQ6UWH4 519 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 ALKAL2Q6UX46 152 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 NLRC3Q7RTR2 1065 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 SIAH3Q8IW03 269 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 NXPE1Q8N323 547 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 BVESQ8NE79 360 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 RPLP0P6Q8NHW5 317 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 ADAMTS14Q8WXS8 1223 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 SLC38A2Q96QD8 506 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 SMAD5Q99717 465 aaKnown RBP17.04■□□□□ 0.32
PKP3-201ENST00000331563 NLGN3Q9NZ94 848 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 FBXL2Q9UKC9 423 aa17.04■□□□□ 0.32
PKP3-201ENST00000331563 IRGMA1A4Y4 181 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 RFXAPO00287 272 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 PRODHO43272 600 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 GATCO43716 136 aaKnown RBP17.03■□□□□ 0.32
PKP3-201ENST00000331563 KDM4BO94953 1096 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 CXCL14O95715 111 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 EPHX1P07099 455 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 C8GP07360 202 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 CBSLP0DN79 551 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 ARAFP10398 606 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 CBSP35520 551 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 PCBP3P57721 371 aaKnown RBP17.03■□□□□ 0.32
PKP3-201ENST00000331563 TAP2Q03519 686 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 FGL1Q08830 312 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 PIN1Q13526 163 aaPredicted RBP17.03■□□□□ 0.32
PKP3-201ENST00000331563 METTL11BQ5VVY1 283 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 LIPJQ5W064 366 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 OR4F15Q8NGB8 312 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 OR52N1Q8NH53 320 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 BHLHE41Q9C0J9 482 aaPredicted RBP17.03■□□□□ 0.32
PKP3-201ENST00000331563 REEP4Q9H6H4 257 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 MVB12BQ9H7P6 319 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 PURGQ9UJV8 347 aaKnown RBP17.03■□□□□ 0.32
PKP3-201ENST00000331563 CCL26Q9Y258 94 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 MPTX1A8MV57 137 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 ST8SIA5O15466 376 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 MT-ND4P03905 459 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 LPLP06858 475 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms