RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 LRR1Q96L50 414 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 RAB9BQ9NP90 201 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 MLXQ9UH92 298 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 DLEC1Q9Y238 1755 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 SHANK3Q9BYB0 1731 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 A0A1B0GVT2 93 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 PLOD2O00469 737 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 PVALBP20472 110 aaPredicted RBP10.75□□□□□ -0.69
COL4A5-201ENST00000328300 IRS1P35568 1242 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 MZT1Q08AG7 82 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 TSC22D1Q15714 1073 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 TMEM184AQ6ZMB5 413 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 OR14L1PQ8NHC6 308 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 PROKR1Q8TCW9 393 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 GTF2H4Q92759 462 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 HOXB13Q92826 284 aaPredicted RBP10.75□□□□□ -0.69
COL4A5-201ENST00000328300 C12orf43Q96C57 262 aaKnown RBP10.75□□□□□ -0.69
COL4A5-201ENST00000328300 KLHL15Q96M94 604 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 FRMD6Q96NE9 622 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 NMNAT1Q9HAN9 279 aaPredicted RBP10.75□□□□□ -0.69
COL4A5-201ENST00000328300 AGPAT4Q9NRZ5 378 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 QSER1Q2KHR3 1735 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 LATO43561 262 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 ZNF43P17038 809 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 SLC6A19Q695T7 634 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 ZNF704Q6ZNC4 412 aaPredicted RBP10.75□□□□□ -0.69
COL4A5-201ENST00000328300 GATSQ8NAP1 163 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 PGAM5Q96HS1 289 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 KCNK12Q9HB15 430 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 IL21Q9HBE4 155 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 C2orf42Q9NWW7 574 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 DEFB110Q30KQ9 67 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 SLC35F1Q5T1Q4 408 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 MAELQ96JY0 434 aaKnown RBP10.75□□□□□ -0.69
COL4A5-201ENST00000328300 PKMYT1Q99640 499 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 CPPED1Q9BRF8 314 aaPredicted RBP10.75□□□□□ -0.69
COL4A5-201ENST00000328300 C1QTNF2Q9BXJ5 285 aa10.75□□□□□ -0.69
COL4A5-201ENST00000328300 MCTS1Q9ULC4 181 aaKnown RBP10.75□□□□□ -0.69
COL4A5-201ENST00000328300 BOKQ9UMX3 212 aaPredicted RBP10.75□□□□□ -0.69
COL4A5-201ENST00000328300 PTRH2Q9Y3E5 179 aaKnown RBP10.75□□□□□ -0.69
COL4A5-201ENST00000328300 ECM29Q5VYK3 1845 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 C11orf98E9PRG8 122 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 OR7A17O14581 309 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 SLC35E2P0CK97 266 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 ANXA3P12429 323 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 FKBP2P26885 142 aaKnown RBP10.74□□□□□ -0.69
COL4A5-201ENST00000328300 C14orf28Q4W4Y0 310 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 OR52R1Q8NGF1 315 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 SGCDQ92629 289 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 COQ10AQ96MF6 247 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 MED11Q9P086 117 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 ZNF337Q9Y3M9 751 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 SLC1A7O00341 560 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 RAB40BQ12829 278 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 SGCAQ16586 387 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 EIF5AL1Q6IS14 154 aaKnown RBP10.74□□□□□ -0.69
COL4A5-201ENST00000328300 PARM1Q6UWI2 310 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 PAQR7Q86WK9 346 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 KMT5CQ86Y97 462 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 GHDCQ8N2G8 530 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 LINC00615Q96LM1 132 aaPredicted RBP10.74□□□□□ -0.69
COL4A5-201ENST00000328300 ACTR6Q9GZN1 396 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 ZNF443Q9Y2A4 671 aaPredicted RBP10.74□□□□□ -0.69
COL4A5-201ENST00000328300 LRRC37AA6NMS7 1700 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 TMEM265A0A087WTH1 108 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 IDUAP35475 653 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 VASPP50552 380 aaPredicted RBP10.74□□□□□ -0.69
COL4A5-201ENST00000328300 ADPRHP54922 357 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 BNIP3Q12983 259 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 ALG10Q5BKT4 473 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 ADGRG5Q8IZF4 528 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 OR10Q1Q8NGQ4 319 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 MZB1Q8WU39 189 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 OR7D2Q96RA2 312 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 MGLLQ99685 303 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 FKBP14Q9NWM8 211 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 VAPAQ9P0L0 249 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 SLC6A14Q9UN76 642 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 TRBV5-4A0A0C4DH59 114 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 H3BSA7 217 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 CHP2O43745 196 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 TPMTP51580 245 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 ZNF181Q2M3W8 571 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 ZNF565Q8N9K5 539 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 SPTSSAQ969W0 71 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 CIDECQ96AQ7 238 aaPredicted RBP10.74□□□□□ -0.69
COL4A5-201ENST00000328300 A4GALTQ9NPC4 353 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 PAK1IP1Q9NWT1 392 aaPredicted RBP10.74□□□□□ -0.69
COL4A5-201ENST00000328300 CDC40O60508 579 aaKnown RBP eCLIP10.74□□□□□ -0.69
COL4A5-201ENST00000328300 AIFM1O95831 613 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 DCDP81605 110 aaKnown RBP10.74□□□□□ -0.69
COL4A5-201ENST00000328300 NEIL3Q8TAT5 605 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 SLC46A1Q96NT5 459 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 NUFIP1Q9UHK0 495 aaKnown RBP10.74□□□□□ -0.69
COL4A5-201ENST00000328300 ASB4Q9Y574 426 aa10.74□□□□□ -0.69
COL4A5-201ENST00000328300 A0A075B6Q4 140 aa10.73□□□□□ -0.69
COL4A5-201ENST00000328300 EFCAB7A8K855 629 aa10.73□□□□□ -0.69
COL4A5-201ENST00000328300 ZNF878C9JN71 531 aa10.73□□□□□ -0.69
COL4A5-201ENST00000328300 PLRG1O43660 514 aaKnown RBP10.73□□□□□ -0.69
COL4A5-201ENST00000328300 PSKH1P11801 424 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms