RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 SLCO2B1O94956 709 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 UBL3O95164 117 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 TGM6O95932 706 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 URODP06132 367 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 HOXB1P14653 301 aaPredicted RBP11.98□□□□□ -0.49
CCDC60-201ENST00000327554 RNF144AP50876 292 aaPredicted RBP11.98□□□□□ -0.49
CCDC60-201ENST00000327554 SIM1P81133 766 aaPredicted RBP11.98□□□□□ -0.49
CCDC60-201ENST00000327554 FLI1Q01543 452 aaPredicted RBP11.98□□□□□ -0.49
CCDC60-201ENST00000327554 CLEC12AQ5QGZ9 265 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 C17orf107Q6ZR85 190 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 TPRG1Q6ZUI0 275 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 HSD17B13Q7Z5P4 300 aaPredicted RBP11.98□□□□□ -0.49
CCDC60-201ENST00000327554 C7orf57Q8NEG2 295 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 OR11G2Q8NGC1 345 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 VOPP1Q96AW1 172 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 ASIC4Q96FT7 647 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 ZNF607Q96SK3 696 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 TIMP4Q99727 224 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 TREX2Q9BQ50 279 aaPredicted RBP11.98□□□□□ -0.49
CCDC60-201ENST00000327554 UQCC2Q9BRT2 126 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 JAM3Q9BX67 310 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 SAV1Q9H4B6 383 aaPredicted RBP11.98□□□□□ -0.49
CCDC60-201ENST00000327554 CTPS2Q9NRF8 586 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 MYADML2A6NDP7 307 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 TRABD2BA6NFA1 517 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 NPC1O15118 1278 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 CH25HO95992 272 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 TBXA2RP21731 343 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 CALCRP30988 508 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 BDH1Q02338 343 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 SNTB2Q13425 540 aaKnown RBP11.98□□□□□ -0.49
CCDC60-201ENST00000327554 SYPL1Q16563 259 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 SLC30A6Q6NXT4 461 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 ALKAL2Q6UX46 152 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 SERINC5Q86VE9 423 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 CPXM2Q8N436 756 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 SIRT6Q8N6T7 355 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 OR6T1Q8NGN1 323 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 OR4Q3Q8NH05 313 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 SCARB1Q8WTV0 552 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 ECHDC3Q96DC8 303 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 TMEM169Q96HH4 297 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 ZFP3Q96NJ6 502 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.98□□□□□ -0.49
CCDC60-201ENST00000327554 DDX31Q9H8H2 851 aaKnown RBP11.98□□□□□ -0.49
CCDC60-201ENST00000327554 MIEF1Q9NQG6 463 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 NKIRAS2Q9NYR9 191 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 IL20Q9NYY1 176 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 CFAP97Q9P2B7 532 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 TP53BP1Q12888 1972 aaPredicted RBP11.98□□□□□ -0.49
CCDC60-201ENST00000327554 A0A087WUU8 490 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 TMEM88BA6NKF7 163 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 OR6C75A6NL08 312 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 MCRIP1C9JLW8 97 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 J3QRE1 110 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 ABCD4O14678 606 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 SYN3O14994 580 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 SURF4O15260 269 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 HYAL3O43820 417 aaPredicted RBP11.97□□□□□ -0.49
CCDC60-201ENST00000327554 PNLIPRP1P54315 467 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 RPS7P62081 194 aaKnown RBP11.97□□□□□ -0.49
CCDC60-201ENST00000327554 TLE2Q04725 743 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 DYRK1AQ13627 763 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 CAMK1Q14012 370 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 SLBPQ14493 270 aaKnown RBP eCLIP11.97□□□□□ -0.49
CCDC60-201ENST00000327554 HLXQ14774 488 aaPredicted RBP11.97□□□□□ -0.49
CCDC60-201ENST00000327554 SLC22A10Q63ZE4 541 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 C6orf120Q7Z4R8 191 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 SLITRK4Q8IW52 837 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 DCAF4L2Q8NA75 395 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 ASZ1Q8WWH4 475 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 SORBS1Q9BX66 1292 aaKnown RBP11.97□□□□□ -0.49
CCDC60-201ENST00000327554 CA10Q9NS85 328 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 HPF1Q9NWY4 346 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 PRKAG2Q9UGJ0 569 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 GPR160Q9UJ42 338 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 CLEC4AQ9UMR7 237 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 ENTPD4Q9Y227 616 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 CA5BQ9Y2D0 317 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 MTCL1Q9Y4B5 1905 aaKnown RBP11.97□□□□□ -0.49
CCDC60-201ENST00000327554 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 ZNF840PA6NDX5 716 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 ANXA2P2A6NMY6 339 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 LRRN3E7EW58 273 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 GMDSO60547 372 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 ZNF821O75541 412 aaPredicted RBP11.97□□□□□ -0.49
CCDC60-201ENST00000327554 NFYAP23511 347 aaPredicted RBP11.97□□□□□ -0.49
CCDC60-201ENST00000327554 HTR1FP30939 366 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 VIPR1P32241 457 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 TRIM23P36406 574 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 GPR17Q13304 367 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 CLLU1OSQ5K130 101 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 OLIG3Q7RTU3 272 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 EIF4E3Q8N5X7 224 aaKnown RBP11.97□□□□□ -0.49
CCDC60-201ENST00000327554 HERVK_113Q902F9 699 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 GIMAP5Q96F15 307 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 WDR89Q96FK6 387 aaPredicted RBP11.97□□□□□ -0.49
CCDC60-201ENST00000327554 ART5Q96L15 291 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 PRRC1Q96M27 445 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 LRRN3Q9H3W5 708 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms