RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 DLSTP36957 453 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 KDM4DQ6B0I6 523 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 CDC73Q6P1J9 531 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 DTX1Q86Y01 620 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 AMER2Q8N7J2 671 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 PROX1Q92786 737 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 C16orf58Q96GQ5 468 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 ZNF354BQ96LW1 612 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 SEC14L3Q9UDX4 400 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 WASF3Q9UPY6 502 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 FAM32AQ9Y421 112 aaKnown RBP17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 LYVE1Q9Y5Y7 322 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 TNFRSF11BO00300 401 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 DDAH2O95865 285 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 CD63P08962 238 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 DAPP51397 102 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 FUT5Q11128 374 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 KCTD21Q4G0X4 260 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 ATAD3BQ5T9A4 648 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 MFSD12Q6NUT3 480 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 FAHD1Q6P587 224 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 ZNF605Q86T29 641 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 ZNF321PQ8N8H1 164 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 C7orf57Q8NEG2 295 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 GPR32P1Q8NGA4 272 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 OR52R1Q8NGF1 315 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 COL21A1Q96P44 957 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 TRNT1Q96Q11 434 aaKnown RBP17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 BARD1Q99728 777 aaKnown RBP17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 PIP5K1AQ99755 562 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 YIPF4Q9BSR8 244 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 YTHDF1Q9BYJ9 559 aaKnown RBP17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 CLCA3PQ9Y6N3 262 aa17.4■□□□□ 0.38
EXOSC3-201ENST00000327304 C21orf140B9A014 251 aa17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 SLC16A6O15403 523 aa17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 CLPSP04118 112 aa17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 ITGAMP11215 1152 aa17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 CDH2P19022 906 aaPredicted RBP17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 HMGA2P52926 109 aa17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 RPS15P62841 145 aaKnown RBP17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 FUT7Q11130 342 aa17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 KCNAB2Q13303 367 aa17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 APOFQ13790 326 aa17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 TGIF1Q15583 401 aa17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 TTC33Q6PID6 262 aaPredicted RBP17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 CPEB2Q7Z5Q1 589 aaKnown RBP17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 CYP4Z1Q86W10 505 aa17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 OR4C15Q8NGM1 316 aa17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 OR14A16Q8NHC5 309 aa17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 NXPE2Q96DL1 559 aa17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 OTUB1Q96FW1 271 aaPredicted RBP17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 SENP5Q96HI0 755 aaPredicted RBP17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 WDR77Q9BQA1 342 aaPredicted RBP17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 SCNM1Q9BWG6 230 aa17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 OR8D2Q9GZM6 311 aa17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 GIN1Q9NXP7 522 aa17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 TESMINQ9Y4I5 508 aa17.39■□□□□ 0.37
EXOSC3-201ENST00000327304 SYNDIG1LA6NDD5 238 aa17.38■□□□□ 0.37
EXOSC3-201ENST00000327304 A8MVJ9 347 aa17.38■□□□□ 0.37
EXOSC3-201ENST00000327304 CLIC3O95833 236 aa17.38■□□□□ 0.37
EXOSC3-201ENST00000327304 CHRM4P08173 479 aa17.38■□□□□ 0.37
EXOSC3-201ENST00000327304 RPS6KA3P51812 740 aa17.38■□□□□ 0.37
EXOSC3-201ENST00000327304 SPIBQ01892 262 aa17.38■□□□□ 0.37
EXOSC3-201ENST00000327304 IL18R1Q13478 541 aa17.38■□□□□ 0.37
EXOSC3-201ENST00000327304 GPAT3Q53EU6 434 aa17.38■□□□□ 0.37
EXOSC3-201ENST00000327304 ANKRD34AQ69YU3 496 aa17.38■□□□□ 0.37
EXOSC3-201ENST00000327304 HEPHL1Q6MZM0 1159 aa17.38■□□□□ 0.37
EXOSC3-201ENST00000327304 ZCCHC12Q6PEW1 402 aa17.38■□□□□ 0.37
EXOSC3-201ENST00000327304 WDR53Q7Z5U6 358 aaPredicted RBP17.38■□□□□ 0.37
EXOSC3-201ENST00000327304 OFCC1Q8IZS5 231 aa17.38■□□□□ 0.37
EXOSC3-201ENST00000327304 PIK3C3Q8NEB9 887 aa17.38■□□□□ 0.37
EXOSC3-201ENST00000327304 SLC2A12Q8TD20 617 aa17.38■□□□□ 0.37
EXOSC3-201ENST00000327304 ADAMTS15Q8TE58 950 aa17.38■□□□□ 0.37
EXOSC3-201ENST00000327304 MUS81Q96NY9 551 aa17.38■□□□□ 0.37
EXOSC3-201ENST00000327304 C19orf25Q9UFG5 118 aaPredicted RBP17.38■□□□□ 0.37
EXOSC3-201ENST00000327304 KCND3Q9UK17 655 aa17.38■□□□□ 0.37
EXOSC3-201ENST00000327304 HS3ST3B1Q9Y662 390 aa17.38■□□□□ 0.37
EXOSC3-201ENST00000327304 CLPTM1O96005 669 aa17.37■□□□□ 0.37
EXOSC3-201ENST00000327304 CYP27C1Q4G0S4 372 aa17.37■□□□□ 0.37
EXOSC3-201ENST00000327304 C8orf59Q8N0T1 100 aaPredicted RBP17.37■□□□□ 0.37
EXOSC3-201ENST00000327304 IL22RA1Q8N6P7 574 aa17.37■□□□□ 0.37
EXOSC3-201ENST00000327304 ZNF615Q8N8J6 731 aa17.37■□□□□ 0.37
EXOSC3-201ENST00000327304 GIPC3Q8TF64 312 aa17.37■□□□□ 0.37
EXOSC3-201ENST00000327304 DAZLQ92904 295 aaKnown RBP17.37■□□□□ 0.37
EXOSC3-201ENST00000327304 ZNF578Q96N58 590 aaPredicted RBP17.37■□□□□ 0.37
EXOSC3-201ENST00000327304 PSD2Q9BQI7 771 aa17.37■□□□□ 0.37
EXOSC3-201ENST00000327304 GPR87Q9BY21 358 aa17.37■□□□□ 0.37
EXOSC3-201ENST00000327304 KIF17Q9P2E2 1029 aa17.37■□□□□ 0.37
EXOSC3-201ENST00000327304 MRPS18BQ9Y676 258 aaKnown RBP17.37■□□□□ 0.37
EXOSC3-201ENST00000327304 DSPPQ9NZW4 1301 aa17.37■□□□□ 0.37
EXOSC3-201ENST00000327304 LOC102723996A0A087X1L8 192 aa17.37■□□□□ 0.37
EXOSC3-201ENST00000327304 LOC100130705A0A1B0GUX0 176 aa17.37■□□□□ 0.37
EXOSC3-201ENST00000327304 TRIM64A6NGJ6 449 aa17.37■□□□□ 0.37
EXOSC3-201ENST00000327304 SAGE2PA6NJ88 616 aa17.37■□□□□ 0.37
EXOSC3-201ENST00000327304 DYRK3O43781 588 aa17.37■□□□□ 0.37
EXOSC3-201ENST00000327304 UGT2B11O75310 529 aa17.37■□□□□ 0.37
EXOSC3-201ENST00000327304 SEC24DO94855 1032 aaPredicted RBP17.37■□□□□ 0.37
EXOSC3-201ENST00000327304 IGKV3-11P04433 115 aa17.37■□□□□ 0.37
EXOSC3-201ENST00000327304 LIMS1P48059 325 aa17.37■□□□□ 0.37
EXOSC3-201ENST00000327304 LAPTM4AQ15012 233 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms