RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 GREM1O60565 184 aa13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 EPPINO95925 133 aa13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 ALDOBP05062 364 aa13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 ZNF19P17023 458 aa13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 POLR2LP62875 67 aaKnown RBP13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 FKBP1BP68106 108 aa13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 E2F1Q01094 437 aa13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 PRKCZQ05513 592 aa13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 MFSD13AQ14CX5 517 aa13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 PRAMEF14Q5SWL7 426 aa13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 PRAMEF13Q5VWM6 474 aa13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 VASNQ6EMK4 673 aa13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 FAAP20Q6NZ36 180 aa13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 KIAA1324Q6UXG2 1013 aaKnown RBP13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 ZNF782Q6ZMW2 699 aaPredicted RBP13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 CFAP77Q6ZQR2 320 aa13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 RTL4Q6ZR62 310 aa13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 MS4A15Q8N5U1 240 aa13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 MORN4Q8NDC4 146 aa13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 OR5P2Q8WZ92 322 aa13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 VN1R3Q9BXE9 311 aa13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 OR10A4Q9H209 315 aa13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 GHITMQ9H3K2 345 aa13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 SIRT3Q9NTG7 399 aaPredicted RBP13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 SEMA4GQ9NTN9 838 aa13.4□□□□□ -0.26
CHRNA3-201ENST00000326828 SLC5A10A0PJK1 596 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 PRR23AA6NEV1 266 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 GLTPD2A6NH11 291 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 SLC19A2O60779 497 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 FZD7O75084 574 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 GYPBP06028 91 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 HSF2Q03933 536 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 EOGTQ5NDL2 527 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 SLC8B1Q6J4K2 584 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 TMEM107Q6UX40 140 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 SERPINA12Q8IW75 414 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 OR5M3Q8NGP4 307 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 OR9A1PQ8NGU1 263 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 COQ8AQ8NI60 647 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 NXPE2Q96DL1 559 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 LINC00052Q96N35 136 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 B3GNT4Q9C0J1 378 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 AUNIPQ9H7T9 357 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 HINT3Q9NQE9 182 aaKnown RBP13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 CCL26Q9Y258 94 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 DAPL1A0PJW8 107 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 GPR171O14626 319 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 RNF13O43567 381 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 OR1F1O43749 312 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 ANKRD34CP0C6C1 535 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 CLCNKAP51800 687 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 ZNF33BQ06732 778 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 CRHR2Q13324 411 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 ZNF311Q5JNZ3 666 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 ZNF322Q6U7Q0 402 aaPredicted RBP13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 CYB561A3Q8NBI2 242 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 OR2A12Q8NGT7 310 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 FGF20Q9NP95 211 aaPredicted RBP13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 BRD7Q9NPI1 651 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 NANSQ9NR45 359 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 WSB2Q9NYS7 404 aaPredicted RBP13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 KNL1Q8NG31 2342 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 TEX51A0A1B0GUA7 166 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 A0A1W2PPL8 197 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 FOXE1O00358 373 aaPredicted RBP13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 SCAMP1O15126 338 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 EFCAB14O75071 495 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 HMGN2P05204 90 aaKnown RBP13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 H2AFB2P0C5Z0 115 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 PTHLHP12272 177 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 POU3F2P20265 443 aaPredicted RBP13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 PNLIPRP1P54315 467 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 C1orf94Q6P1W5 598 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 SFXN4Q6P4A7 337 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 METAP1DQ6UB28 335 aaPredicted RBP13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 ANKRD53Q8N9V6 530 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 TMEM255BQ8WV15 326 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 METTL2AQ96IZ6 378 aaKnown RBP13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 ALG8Q9BVK2 526 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 BTBD1Q9H0C5 482 aa13.39□□□□□ -0.27
CHRNA3-201ENST00000326828 CHST10O43529 356 aa13.38□□□□□ -0.27
CHRNA3-201ENST00000326828 RGS9O75916 674 aaPredicted RBP13.38□□□□□ -0.27
CHRNA3-201ENST00000326828 TRHRP34981 398 aaPredicted RBP13.38□□□□□ -0.27
CHRNA3-201ENST00000326828 GCGRP47871 477 aa13.38□□□□□ -0.27
CHRNA3-201ENST00000326828 EPHB3P54753 998 aa13.38□□□□□ -0.27
CHRNA3-201ENST00000326828 GPR68Q15743 365 aa13.38□□□□□ -0.27
CHRNA3-201ENST00000326828 TCTN1Q2MV58 587 aa13.38□□□□□ -0.27
CHRNA3-201ENST00000326828 ZNF697Q5TEC3 545 aa13.38□□□□□ -0.27
CHRNA3-201ENST00000326828 GPR139Q6DWJ6 353 aa13.38□□□□□ -0.27
CHRNA3-201ENST00000326828 ALKAL2Q6UX46 152 aa13.38□□□□□ -0.27
CHRNA3-201ENST00000326828 C17orf99Q6UX52 265 aa13.38□□□□□ -0.27
CHRNA3-201ENST00000326828 PLA2G15Q8NCC3 412 aa13.38□□□□□ -0.27
CHRNA3-201ENST00000326828 SRFBP1Q8NEF9 429 aaKnown RBP13.38□□□□□ -0.27
CHRNA3-201ENST00000326828 C2orf15Q8WU43 125 aaKnown RBP13.38□□□□□ -0.27
CHRNA3-201ENST00000326828 COL26A1Q96A83 441 aa13.38□□□□□ -0.27
CHRNA3-201ENST00000326828 WDR89Q96FK6 387 aaPredicted RBP13.38□□□□□ -0.27
CHRNA3-201ENST00000326828 MRPL9Q9BYD2 267 aaKnown RBP13.38□□□□□ -0.27
CHRNA3-201ENST00000326828 ELAC1Q9H777 363 aaKnown RBP13.38□□□□□ -0.27
CHRNA3-201ENST00000326828 CYSLTR2Q9NS75 346 aa13.38□□□□□ -0.27
CHRNA3-201ENST00000326828 SPG21Q9NZD8 308 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms