RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 LRIT1Q9P2V4 623 aa17.96■□□□□ 0.47
CHMP6-201ENST00000325167 CHST2Q9Y4C5 530 aa17.96■□□□□ 0.47
CHMP6-201ENST00000325167 PIEZO1Q92508 2521 aa17.95■□□□□ 0.46
CHMP6-201ENST00000325167 A0A087WUU8 490 aa17.95■□□□□ 0.46
CHMP6-201ENST00000325167 A0A1W2PPW3 197 aa17.95■□□□□ 0.46
CHMP6-201ENST00000325167 DUX1O43812 170 aa17.95■□□□□ 0.46
CHMP6-201ENST00000325167 BRINP1O60477 761 aa17.95■□□□□ 0.46
CHMP6-201ENST00000325167 CNOT3O75175 753 aaKnown RBP17.95■□□□□ 0.46
CHMP6-201ENST00000325167 CBX7O95931 251 aa17.95■□□□□ 0.46
CHMP6-201ENST00000325167 BCKDHBP21953 392 aa17.95■□□□□ 0.46
CHMP6-201ENST00000325167 GABRA3P34903 492 aa17.95■□□□□ 0.46
CHMP6-201ENST00000325167 MAP2K4P45985 399 aa17.95■□□□□ 0.46
CHMP6-201ENST00000325167 FNTBP49356 437 aa17.95■□□□□ 0.46
CHMP6-201ENST00000325167 FOXD4Q12950 439 aaPredicted RBP17.95■□□□□ 0.46
CHMP6-201ENST00000325167 GPR68Q15743 365 aa17.95■□□□□ 0.46
CHMP6-201ENST00000325167 OCLNQ16625 522 aa17.95■□□□□ 0.46
CHMP6-201ENST00000325167 RASSF6Q6ZTQ3 369 aa17.95■□□□□ 0.46
CHMP6-201ENST00000325167 MED25Q71SY5 747 aa17.95■□□□□ 0.46
CHMP6-201ENST00000325167 P2RY8Q86VZ1 359 aa17.95■□□□□ 0.46
CHMP6-201ENST00000325167 CLIP4Q8N3C7 705 aa17.95■□□□□ 0.46
CHMP6-201ENST00000325167 OR52R1Q8NGF1 315 aa17.95■□□□□ 0.46
CHMP6-201ENST00000325167 SLC35B4Q969S0 331 aa17.95■□□□□ 0.46
CHMP6-201ENST00000325167 SLC41A3Q96GZ6 507 aa17.95■□□□□ 0.46
CHMP6-201ENST00000325167 PRRX2Q99811 253 aa17.95■□□□□ 0.46
CHMP6-201ENST00000325167 POLDIP3Q9BY77 421 aaKnown RBP17.95■□□□□ 0.46
CHMP6-201ENST00000325167 HCN3Q9P1Z3 774 aa17.95■□□□□ 0.46
CHMP6-201ENST00000325167 GPR55Q9Y2T6 319 aaPredicted RBP17.95■□□□□ 0.46
CHMP6-201ENST00000325167 RPL36Q9Y3U8 105 aaKnown RBP17.95■□□□□ 0.46
CHMP6-201ENST00000325167 USP34Q70CQ2 3546 aa17.94■□□□□ 0.46
CHMP6-201ENST00000325167 TDRD6O60522 2096 aaKnown RBP17.94■□□□□ 0.46
CHMP6-201ENST00000325167 CPSF4LA6NMK7 179 aaKnown RBP17.94■□□□□ 0.46
CHMP6-201ENST00000325167 SNTNA6NMZ2 147 aa17.94■□□□□ 0.46
CHMP6-201ENST00000325167 HRO43593 1189 aa17.94■□□□□ 0.46
CHMP6-201ENST00000325167 PRAMEF2O60811 474 aa17.94■□□□□ 0.46
CHMP6-201ENST00000325167 GLB1P16278 677 aa17.94■□□□□ 0.46
CHMP6-201ENST00000325167 STAT5AP42229 794 aa17.94■□□□□ 0.46
CHMP6-201ENST00000325167 STT3AP46977 705 aa17.94■□□□□ 0.46
CHMP6-201ENST00000325167 ARL4DP49703 201 aa17.94■□□□□ 0.46
CHMP6-201ENST00000325167 TMEM236Q5W0B7 351 aa17.94■□□□□ 0.46
CHMP6-201ENST00000325167 HMGN2P46Q86SG4 172 aa17.94■□□□□ 0.46
CHMP6-201ENST00000325167 KMT5CQ86Y97 462 aa17.94■□□□□ 0.46
CHMP6-201ENST00000325167 TEX47Q8TBZ9 253 aa17.94■□□□□ 0.46
CHMP6-201ENST00000325167 DTNBP1Q96EV8 351 aa17.94■□□□□ 0.46
CHMP6-201ENST00000325167 PEX11GQ96HA9 241 aa17.94■□□□□ 0.46
CHMP6-201ENST00000325167 CDCA4Q9BXL8 241 aa17.94■□□□□ 0.46
CHMP6-201ENST00000325167 RACGAP1Q9H0H5 632 aa17.94■□□□□ 0.46
CHMP6-201ENST00000325167 SEMA4GQ9NTN9 838 aa17.94■□□□□ 0.46
CHMP6-201ENST00000325167 NLGN3Q9NZ94 848 aa17.94■□□□□ 0.46
CHMP6-201ENST00000325167 TESQ9UGI8 421 aaKnown RBP17.94■□□□□ 0.46
CHMP6-201ENST00000325167 RNF215Q9Y6U7 377 aa17.94■□□□□ 0.46
CHMP6-201ENST00000325167 DMDP11532 3685 aa17.94■□□□□ 0.46
CHMP6-201ENST00000325167 IGHV5-51A0A0C4DH38 117 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 IRGMA1A4Y4 181 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 CLDN24A6NM45 220 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 TPST2O60704 377 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 SOX14O95416 240 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 CT62P0C5K7 136 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 TNNI3P19429 210 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 FPR3P25089 353 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 PSMD4P55036 377 aaKnown RBP17.93■□□□□ 0.46
CHMP6-201ENST00000325167 GFERP55789 205 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 HSD11B2P80365 405 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 ST3GAL4Q11206 333 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 EXOSC7Q15024 291 aaKnown RBP17.93■□□□□ 0.46
CHMP6-201ENST00000325167 SLC16A12Q6ZSM3 486 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 MBOAT2Q6ZWT7 520 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 ZNF367Q7RTV3 350 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 C11orf74Q86VG3 221 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 RNF113BQ8IZP6 322 aaKnown RBP17.93■□□□□ 0.46
CHMP6-201ENST00000325167 FAM26EQ8N5C1 309 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 B3GNT7Q8NFL0 401 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 MMABQ96EY8 250 aaPredicted RBP17.93■□□□□ 0.46
CHMP6-201ENST00000325167 ALOXE3Q9BYJ1 711 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 FOLH1BQ9HBA9 442 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 MMACHCQ9Y4U1 282 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 HEMK1Q9Y5R4 338 aaPredicted RBP17.93■□□□□ 0.46
CHMP6-201ENST00000325167 CACNA1HO95180 2353 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 TRAPPC13A5PLN9 417 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 GALR2O43603 387 aaPredicted RBP17.93■□□□□ 0.46
CHMP6-201ENST00000325167 SDC3O75056 442 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 TP53P04637 393 aaPredicted RBP17.93■□□□□ 0.46
CHMP6-201ENST00000325167 GNSP15586 552 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 TRHRP34981 398 aaPredicted RBP17.93■□□□□ 0.46
CHMP6-201ENST00000325167 GIPRP48546 466 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 ARRB1P49407 418 aaPredicted RBP17.93■□□□□ 0.46
CHMP6-201ENST00000325167 PCYT1AP49585 367 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 CDK5Q00535 292 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 DCTN2Q13561 401 aaKnown RBP17.93■□□□□ 0.46
CHMP6-201ENST00000325167 TMEM44Q2T9K0 475 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 YOD1Q5VVQ6 348 aaPredicted RBP17.93■□□□□ 0.46
CHMP6-201ENST00000325167 LINC00299Q6ZSB3 139 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 GDF7Q7Z4P5 450 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 CLDN22Q8N7P3 220 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 SIMC1Q8NDZ2 872 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 OIT3Q8WWZ8 545 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 PIK3R3Q92569 461 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 OSTF1Q92882 214 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 SLC38A2Q96QD8 506 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 RHNO1Q9BSD3 238 aa17.93■□□□□ 0.46
CHMP6-201ENST00000325167 UCKL1Q9NWZ5 548 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms