RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 INMT-MINDY4F8WBC2 141 aa12.08□□□□□ -0.48
HMGCS1-201ENST00000325110 EMC8O43402 210 aa12.08□□□□□ -0.48
HMGCS1-201ENST00000325110 CHST10O43529 356 aa12.08□□□□□ -0.48
HMGCS1-201ENST00000325110 LIMS3P0CW19 117 aa12.08□□□□□ -0.48
HMGCS1-201ENST00000325110 LIMS4P0CW20 117 aa12.08□□□□□ -0.48
HMGCS1-201ENST00000325110 CPEP16870 476 aa12.08□□□□□ -0.48
HMGCS1-201ENST00000325110 TRHRP34981 398 aaPredicted RBP12.08□□□□□ -0.48
HMGCS1-201ENST00000325110 HTR2BP41595 481 aa12.08□□□□□ -0.48
HMGCS1-201ENST00000325110 EPHA5P54756 1037 aa12.08□□□□□ -0.48
HMGCS1-201ENST00000325110 HYAL2Q12891 473 aa12.08□□□□□ -0.48
HMGCS1-201ENST00000325110 C3orf38Q5JPI3 329 aa12.08□□□□□ -0.48
HMGCS1-201ENST00000325110 METRNLQ641Q3 311 aa12.08□□□□□ -0.48
HMGCS1-201ENST00000325110 SIMC1Q8NDZ2 872 aa12.08□□□□□ -0.48
HMGCS1-201ENST00000325110 OR2T33Q8NG76 320 aa12.08□□□□□ -0.48
HMGCS1-201ENST00000325110 SLC41A3Q96GZ6 507 aa12.08□□□□□ -0.48
HMGCS1-201ENST00000325110 SLC6A17Q9H1V8 727 aa12.08□□□□□ -0.48
HMGCS1-201ENST00000325110 GALNT9Q9HCQ5 603 aa12.08□□□□□ -0.48
HMGCS1-201ENST00000325110 MAN2C1Q9NTJ4 1040 aa12.08□□□□□ -0.48
HMGCS1-201ENST00000325110 TAS2R7Q9NYW3 318 aa12.08□□□□□ -0.48
HMGCS1-201ENST00000325110 RANBP2P49792 3224 aaKnown RBP12.08□□□□□ -0.48
HMGCS1-201ENST00000325110 EEF1E1O43324 174 aaKnown RBP12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 CISD3P0C7P0 127 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 CDK10Q15131 360 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 BCL2A1Q16548 175 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 MINDY4Q4G0A6 757 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 DNAJC5GQ8N7S2 189 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 OR2A1Q8NGT9 310 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 TRIM43Q96BQ3 446 aaPredicted RBP12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 SERGEFQ9UGK8 458 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 MAFFQ9ULX9 164 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 A0A0G2JPF8 293 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 IRGMA1A4Y4 181 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 HNRNPCL2B2RXH8 293 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 HNRNPCL3B7ZW38 293 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 H3BSH0 61 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 NARSO43776 548 aaKnown RBP12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 ORC5O43913 435 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 CLEC3AO75596 197 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 PAHP00439 452 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 GNRH1P01148 92 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 HNRNPCL4P0DMR1 293 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 ATP5A1P25705 553 aaKnown RBP12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 AK4P27144 223 aaPredicted RBP12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 CMPK1P30085 196 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 HSD17B2P37059 387 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 PCDH1Q08174 1060 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 E2F2Q14209 437 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 PDGFRLQ15198 375 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 IRF4Q15306 451 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 C1orf94Q6P1W5 598 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 CDK20Q8IZL9 346 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 CLDN22Q8N7P3 220 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 OSTF1Q92882 214 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 RBCK1Q9BYM8 510 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 ISG20L2Q9H9L3 353 aaKnown RBP12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 ATP13A2Q9NQ11 1180 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 UCKL1Q9NWZ5 548 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 DOCK9Q9BZ29 2069 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 A0A1W2PRG6 482 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 MAN2B1O00754 1011 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 GABRA5P31644 462 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 TSPAN31Q12999 210 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 ADGRD2Q7Z7M1 963 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 SNX18Q96RF0 628 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 PINK1Q9BXM7 581 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 ABCG5Q9H222 651 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 PRSS16Q9NQE7 514 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 HINT3Q9NQE9 182 aaKnown RBP12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 ENAMQ9NRM1 1142 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 USP36Q9P275 1121 aaKnown RBP12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 CA5BQ9Y2D0 317 aa12.07□□□□□ -0.48
HMGCS1-201ENST00000325110 A0A0G2JMP0 313 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 A0A0X1KG70 313 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 CHRNB1P11230 501 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 NDUFV2P19404 249 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 RPA4Q13156 261 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 FAM78AQ5JUQ0 283 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 TMEM201Q5SNT2 666 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 LINC00471Q8N535 108 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 TMIEQ8NEW7 156 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 OR4M2Q8NGB6 313 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 OR8H1Q8NGG4 311 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 OR4Q3Q8NH05 313 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 ZNF671Q8TAW3 534 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 APOBEC4Q8WW27 367 aaKnown RBP12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 PIGKQ92643 395 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 RIPOR3Q96MK2 946 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 PLXNB3Q9ULL4 1909 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 MAGEB4O15481 346 aaPredicted RBP12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 ARHGAP19Q14CB8 494 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 BCL2L15Q5TBC7 163 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 ABHD17CQ6PCB6 329 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 SYT9Q86SS6 491 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 COX18Q8N8Q8 333 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 TP53I13Q8NBR0 393 aaPredicted RBP12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 FANK1Q8TC84 345 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 CHAC2Q8WUX2 184 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 MS4A6EQ96DS6 147 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 SLC38A1Q9H2H9 487 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 TRAPPC4Q9Y296 219 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms