RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 THEM6Q8WUY1 208 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 TM4SF18Q96CE8 201 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 KXD1Q9BQD3 176 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 MS4A8Q9BY19 250 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 TEX10Q9NXF1 929 aaPredicted RBP13.87□□□□□ -0.19
TCOF1-201ENST00000323668 GABRPO00591 440 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 POLR1CO15160 346 aaPredicted RBP13.87□□□□□ -0.19
TCOF1-201ENST00000323668 B4GALT2O60909 372 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 TFPIP10646 304 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 OCLNQ16625 522 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 VRK2Q86Y07 508 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 NANOGP1Q8N7R0 232 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 ZNF527Q8NB42 609 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 OR52E2Q8NGJ4 325 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 EID2BQ96D98 161 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 MSANTD3Q96H12 275 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 C12orf4Q9NQ89 552 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.87□□□□□ -0.19
TCOF1-201ENST00000323668 OR14I1A6ND48 311 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 GRXCR1A8MXD5 290 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 KAT7O95251 611 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 AKR1D1P51857 326 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 CHRNEQ04844 493 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 GAS6Q14393 721 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 TMEM69Q5SWH9 247 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 ZCCHC12Q6PEW1 402 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 SLC39A5Q6ZMH5 540 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 PAQR7Q86WK9 346 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 MFSD4AQ8N468 514 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 OR6T1Q8NGN1 323 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 C7orf34Q96L11 122 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 CACNG2Q9Y698 323 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 OR52A4PA6NMU1 304 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 ZNF823P16415 610 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 AK4P27144 223 aaPredicted RBP13.87□□□□□ -0.19
TCOF1-201ENST00000323668 PSPHP78330 225 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 DEFB103AP81534 67 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 PUM1Q14671 1186 aaKnown RBP eCLIP13.87□□□□□ -0.193e-7■■■□□ 18.6
TCOF1-201ENST00000323668 AMZ1Q400G9 498 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 PRSS36Q5K4E3 855 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 C6orf132Q5T0Z8 1188 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 SFRP4Q6FHJ7 346 aaPredicted RBP13.87□□□□□ -0.19
TCOF1-201ENST00000323668 C12orf76Q8N812 135 aaPredicted RBP13.87□□□□□ -0.19
TCOF1-201ENST00000323668 OR2T35Q8NGX2 323 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 RASD1Q9Y272 281 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 LOC105369274A0A096LPK9 316 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 A0A1B0GVC2 190 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 A6NIN4 97 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 SNAPC5O75971 98 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 CST6Q15828 149 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 KLHL24Q6TFL4 600 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 LRRC28Q86X40 367 aaPredicted RBP13.86□□□□□ -0.19
TCOF1-201ENST00000323668 RBM45Q8IUH3 476 aaKnown RBP13.86□□□□□ -0.19
TCOF1-201ENST00000323668 UBQLNLQ8IYU4 475 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 OR4N4Q8N0Y3 316 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 OR6C4Q8NGE1 309 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 OR4K13Q8NH42 304 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 SFXN5Q8TD22 340 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 TMEM239Q8WW34 195 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 NKD1Q969G9 470 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 OR7D2Q96RA2 312 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 CD93Q9NPY3 652 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 TBC1D24Q9ULP9 559 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 RBBP9O75884 186 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 GNALP38405 381 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 NKX3-2P78367 333 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 B4GALNT1Q00973 533 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 ENTPD8Q5MY95 495 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 ZNF765Q7L2R6 523 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 ZNF227Q86WZ6 799 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 TMIEQ8NEW7 156 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 SLC7A6Q92536 515 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 NSMAFQ92636 917 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 FKBP10Q96AY3 582 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 C1QTNF2Q9BXJ5 285 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 OR52D1Q9H346 318 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 ELL3Q9HB65 397 aaPredicted RBP13.86□□□□□ -0.19
TCOF1-201ENST00000323668 PRELID1Q9Y255 219 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 MAU2Q9Y6X3 613 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 A8MVJ9 347 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 RFPL3O75679 317 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 PPM1BO75688 479 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 MMP11P24347 488 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 CDK3Q00526 305 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 GPM6BQ13491 265 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 ODF4Q2M2E3 257 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 ZNF627Q7L945 461 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 SLC25A36Q96CQ1 311 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 CNN2Q99439 309 aaKnown RBP13.86□□□□□ -0.19
TCOF1-201ENST00000323668 QRSL1Q9H0R6 528 aaKnown RBP13.86□□□□□ -0.19
TCOF1-201ENST00000323668 TAAR2Q9P1P5 351 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 HCN3Q9P1Z3 774 aa13.86□□□□□ -0.19
TCOF1-201ENST00000323668 HEPACAM2A8MVW5 462 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 KDM4BO94953 1096 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 CSTAP01040 98 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 RIPPLY1Q0D2K3 151 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 ZNF234Q14588 700 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 CDK10Q15131 360 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 OR5K2Q8NHB8 316 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 PHOSPHO1Q8TCT1 267 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms