RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 LMF1Q96S06 567 aa12.54□□□□□ -0.4
PRPF18-201ENST00000320054 RASL10BQ96S79 203 aa12.54□□□□□ -0.4
PRPF18-201ENST00000320054 HOXD1Q9GZZ0 328 aa12.54□□□□□ -0.4
PRPF18-201ENST00000320054 CDCP1Q9H5V8 836 aa12.54□□□□□ -0.4
PRPF18-201ENST00000320054 DENND2DQ9H6A0 471 aaPredicted RBP12.54□□□□□ -0.4
PRPF18-201ENST00000320054 TRIM45Q9H8W5 580 aaPredicted RBP12.54□□□□□ -0.4
PRPF18-201ENST00000320054 LIN28AQ9H9Z2 209 aaKnown RBP12.54□□□□□ -0.4
PRPF18-201ENST00000320054 DCAF13Q9NV06 445 aaKnown RBP12.54□□□□□ -0.4
PRPF18-201ENST00000320054 RPS6KA6Q9UK32 745 aa12.54□□□□□ -0.4
PRPF18-201ENST00000320054 MKLN1Q9UL63 735 aa12.54□□□□□ -0.4
PRPF18-201ENST00000320054 IGF2RP11717 2491 aa12.54□□□□□ -0.4
PRPF18-201ENST00000320054 FREM2Q5SZK8 3169 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 TCRBV5S2A0A599 114 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 TCRBV3S1A0A5B6 114 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 AGAP5A6NIR3 686 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 ARGFXA6NJG6 315 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 A8MUI8 341 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 ZNF354AO60765 605 aaPredicted RBP12.53□□□□□ -0.4
PRPF18-201ENST00000320054 ITGA10O75578 1167 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 REM1O75628 298 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 MFN2O95140 757 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 ALPPP05187 535 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 DBIP07108 87 aaKnown RBP12.53□□□□□ -0.4
PRPF18-201ENST00000320054 THBS1P07996 1170 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 NGFRP08138 427 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 FBXO45P0C2W1 286 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 IL12BP29460 328 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 AQP1P29972 269 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 ATP12AP54707 1039 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 CCNIQ14094 377 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 EFR3AQ14156 821 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 KPNB1Q14974 876 aaKnown RBP12.53□□□□□ -0.4
PRPF18-201ENST00000320054 GPR68Q15743 365 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 ZNF141Q15928 474 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 MEP1AQ16819 746 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 FLYWCH1Q4VC44 716 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 LRRC23Q53EV4 343 aaPredicted RBP12.53□□□□□ -0.4
PRPF18-201ENST00000320054 CYBRD1Q53TN4 286 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 BROXQ5VW32 411 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 OPN5Q6U736 354 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 CYP2R1Q6VVX0 501 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 CCDC81Q6ZN84 652 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 C16orf47Q6ZP98 133 aaPredicted RBP12.53□□□□□ -0.4
PRPF18-201ENST00000320054 CBLL1Q75N03 491 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 EIF3MQ7L2H7 374 aaKnown RBP12.53□□□□□ -0.4
PRPF18-201ENST00000320054 OLIG3Q7RTU3 272 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 NUP54Q7Z3B4 507 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 ZAR1Q86SH2 424 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 ARMC8Q8IUR7 673 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 APLFQ8IW19 511 aaPredicted RBP12.53□□□□□ -0.4
PRPF18-201ENST00000320054 PEX5LQ8IYB4 626 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 C10orf67Q8IYJ2 551 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 PRR22Q8IZ63 422 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 GALNT16Q8N428 558 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 BRIX1Q8TDN6 353 aaKnown RBP12.53□□□□□ -0.4
PRPF18-201ENST00000320054 TAMM41Q96BW9 452 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 UBQLN4Q9NRR5 601 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 ADPRHL2Q9NX46 363 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 TEKT2Q9UIF3 430 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 SAMD4AQ9UPU9 718 aaKnown RBP12.53□□□□□ -0.4
PRPF18-201ENST00000320054 IFT52Q9Y366 437 aa12.53□□□□□ -0.4
PRPF18-201ENST00000320054 MED19A0JLT2 244 aaPredicted RBP12.52□□□□□ -0.41
PRPF18-201ENST00000320054 HS6ST1O60243 411 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 UGT2B17O75795 530 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 SERPINA1P01009 418 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 C8BP07358 591 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 PABPC4LP0CB38 370 aaKnown RBP12.52□□□□□ -0.41
PRPF18-201ENST00000320054 UMPSP11172 480 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 CYP4B1P13584 511 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 HOXB6P17509 224 aaKnown RBP12.52□□□□□ -0.41
PRPF18-201ENST00000320054 TBXA2RP21731 343 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 ITGA3P26006 1051 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 DCTP40126 519 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 RFX3P48380 749 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 SSR4P51571 173 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 UCNP55089 124 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 SELENOWP63302 87 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 RHDQ02161 417 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 NTRK2Q16620 822 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 ZSWIM7Q19AV6 140 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 ZNF791Q3KP31 576 aaPredicted RBP12.52□□□□□ -0.41
PRPF18-201ENST00000320054 ACER2Q5QJU3 275 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 IRAK1BP1Q5VVH5 260 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 DHRS4L2Q6PKH6 230 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 LRRC69Q6ZNQ3 347 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 GALNT10Q86SR1 603 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 GPALPP1Q8IXQ4 340 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 SIRT6Q8N6T7 355 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 OR52P1PQ8NH57 321 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 SLC26A7Q8TE54 656 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 TTC9Q92623 222 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 EFHD2Q96C19 240 aaPredicted RBP12.52□□□□□ -0.41
PRPF18-201ENST00000320054 ADOQ96SZ5 270 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 ING2Q9H160 280 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 CACYBPQ9HB71 228 aaKnown RBP12.52□□□□□ -0.41
PRPF18-201ENST00000320054 SEC14L3Q9UDX4 400 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 ZNF232Q9UNY5 417 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 RRP15Q9Y3B9 282 aaKnown RBP12.52□□□□□ -0.41
PRPF18-201ENST00000320054 CHD8Q9HCK8 2581 aa12.52□□□□□ -0.41
PRPF18-201ENST00000320054 TMEM8BA6NDV4 472 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms