RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 ULK1O75385 1050 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 NME6O75414 186 aaPredicted RBP12.83□□□□□ -0.36
RPP40-201ENST00000319533 TNFRSF21O75509 655 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 CRCPO75575 148 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 ESRRBO95718 433 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 IL3P08700 152 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 CPA3P15088 417 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 FPR1P21462 350 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 LOXP28300 417 aaPredicted RBP12.83□□□□□ -0.36
RPP40-201ENST00000319533 CCKARP32238 428 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 UGT2B10P36537 528 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 CPOXP36551 454 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 MRPS22P82650 360 aaKnown RBP12.83□□□□□ -0.36
RPP40-201ENST00000319533 OCRLQ01968 901 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 SLC18A2Q05940 514 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 CSTF3Q12996 717 aaKnown RBP12.83□□□□□ -0.36
RPP40-201ENST00000319533 GUSBP1Q15486 140 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 ACKR1Q16570 336 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 OR5M10Q6IEU7 315 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 GALNT18Q6P9A2 607 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 VWA1Q6PCB0 445 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 HDXQ7Z353 690 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 P4HA3Q7Z4N8 544 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 CIARTQ8N365 385 aaPredicted RBP12.83□□□□□ -0.36
RPP40-201ENST00000319533 OR2M3Q8NG83 312 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 FIG4Q92562 907 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 KAT2AQ92830 837 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 ZIM3Q96PE6 472 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 HBEGFQ99075 208 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 SHCBP1LQ9BZQ2 653 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 STMN4Q9H169 189 aaPredicted RBP12.83□□□□□ -0.36
RPP40-201ENST00000319533 RNF122Q9H9V4 155 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 SIRT5Q9NXA8 310 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 KLHL28Q9NXS3 571 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 RAI1Q7Z5J4 1906 aaPredicted RBP12.83□□□□□ -0.36
RPP40-201ENST00000319533 ZANQ9Y493 2812 aa12.83□□□□□ -0.36
RPP40-201ENST00000319533 C17orf51A8MQB3 221 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 SMNDC1O75940 238 aaKnown RBP eCLIP12.82□□□□□ -0.36
RPP40-201ENST00000319533 CD8BP10966 210 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 CHN1P15882 459 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 IL12BP29460 328 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 EVI2BP34910 448 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 KRT20P35900 424 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 EEFSECP57772 596 aaKnown RBP12.82□□□□□ -0.36
RPP40-201ENST00000319533 DNAJB13P59910 316 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 PSG6Q00889 435 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 FGFBP1Q14512 234 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 GANABQ14697 944 aaKnown RBP12.82□□□□□ -0.36
RPP40-201ENST00000319533 TCHHL1Q5QJ38 904 aaPredicted RBP12.82□□□□□ -0.36
RPP40-201ENST00000319533 FAM219BQ5XKK7 198 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 CHMP1BQ7LBR1 199 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 MEIOBQ8N635 442 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 OR7G2Q8NG99 324 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 OR4K17Q8NGC6 315 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 OR4N2Q8NGD1 307 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 PPP1R14CQ8TAE6 165 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 IGFBPL1Q8WX77 278 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 PGM2Q96G03 612 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 APOPT1Q96IL0 206 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 KRTAP3-3Q9BYR6 98 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 KRTAP3-2Q9BYR7 98 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 ACPTQ9BZG2 426 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 OPN3Q9H1Y3 402 aaPredicted RBP12.82□□□□□ -0.36
RPP40-201ENST00000319533 DSN1Q9H410 356 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 GSTO2Q9H4Y5 243 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 MID1IP1Q9NPA3 183 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 SLC35C2Q9NQQ7 365 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 OXSMQ9NWU1 459 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 MKS1Q9NXB0 559 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 TAS2R9Q9NYW1 312 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 LGALS13Q9UHV8 139 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 ZNF175Q9Y473 711 aa12.82□□□□□ -0.36
RPP40-201ENST00000319533 CSPG4Q6UVK1 2322 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 A0A087WV62 115 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 H7C1Q1 480 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 PCDH7O60245 1069 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 MPIP34949 423 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 GSTM5P46439 218 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 SUCLG1P53597 346 aaKnown RBP12.81□□□□□ -0.36
RPP40-201ENST00000319533 HEPACAMQ14CZ8 416 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 GLYR1Q49A26 553 aaPredicted RBP12.81□□□□□ -0.36
RPP40-201ENST00000319533 CYP27C1Q4G0S4 372 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 SPIN4Q56A73 249 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 LIPMQ5VYY2 423 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 C20orf204Q6ZNR8 217 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 FRMD7Q6ZUT3 714 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 TRABD2AQ86V40 505 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 PRIMA1Q86XR5 153 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 SLC44A2Q8IWA5 706 aaPredicted RBP12.81□□□□□ -0.36
RPP40-201ENST00000319533 FAM9CQ8IZT9 166 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 CNEP1R1Q8N9A8 125 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 C16orf78Q8WTQ4 265 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 NUDT8Q8WV74 236 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 EXOSC8Q96B26 276 aaKnown RBP12.81□□□□□ -0.36
RPP40-201ENST00000319533 EFHD2Q96C19 240 aaPredicted RBP12.81□□□□□ -0.36
RPP40-201ENST00000319533 PIK3IP1Q96FE7 263 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 SLC39A3Q9BRY0 314 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 MED18Q9BUE0 208 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 BDH2Q9BUT1 245 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 PFDN4Q9NQP4 134 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms