RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 EPHB3P54753 998 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 ZNF628Q5EBL2 1059 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 C18orf63Q68DL7 685 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 ZNF687Q8N1G0 1237 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 TMEM255BQ8WV15 326 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 CHST8Q9H2A9 424 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 PTPRDP23468 1912 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 CHD7Q9P2D1 2997 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 PLPP1O14494 284 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 ZNF821O75541 412 aaPredicted RBP13.33□□□□□ -0.28
PABPC1-201ENST00000318607 SPDEFO95238 335 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 TCRBP04435 133 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 CSN2P05814 226 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 HSD3B1P14060 373 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 UQCRC2P22695 453 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 CLDN20P56880 219 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 TAP2Q03519 686 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 KIAA0907Q7Z7F0 614 aaPredicted RBP13.33□□□□□ -0.28
PABPC1-201ENST00000318607 CLDN22Q8N7P3 220 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 LINC00052Q96N35 136 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 TRAF4Q9BUZ4 470 aaPredicted RBP13.33□□□□□ -0.28
PABPC1-201ENST00000318607 IFT27Q9BW83 186 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 PPP1R3EQ9H7J1 279 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 MYEF2Q9P2K5 600 aaKnown RBP13.33□□□□□ -0.28
PABPC1-201ENST00000318607 RCE1Q9Y256 329 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 WNT6Q9Y6F9 365 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 CDH10Q9Y6N8 788 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 A0A1B0GVT2 93 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 ZNF860A6NHJ4 632 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 PITPNM1O00562 1244 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 PRODHO43272 600 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 LIPCP11150 499 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 CPEP16870 476 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 SELENOPP49908 381 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 PRAMEF14Q5SWL7 426 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 PRAMEF13Q5VWM6 474 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 MEDAGQ5VYS4 303 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 C17orf64Q86WR6 236 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 TCTE3Q8IZS6 198 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 SIRT6Q8N6T7 355 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 SRFBP1Q8NEF9 429 aaKnown RBP13.32□□□□□ -0.28
PABPC1-201ENST00000318607 FBXW5Q969U6 566 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 MRPL17Q9NRX2 175 aaKnown RBP13.32□□□□□ -0.28
PABPC1-201ENST00000318607 UBQLN2Q9UHD9 624 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 DIMT1Q9UNQ2 313 aaKnown RBP13.32□□□□□ -0.28
PABPC1-201ENST00000318607 TRBV5-4A0A0C4DH59 114 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 NRG2O14511 850 aaPredicted RBP13.32□□□□□ -0.28
PABPC1-201ENST00000318607 ARPC1BO15143 372 aaKnown RBP13.32□□□□□ -0.28
PABPC1-201ENST00000318607 TMPRSS11DO60235 418 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 RAD1O60671 282 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 HCN1O60741 890 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 POP4O95707 220 aaKnown RBP13.32□□□□□ -0.28
PABPC1-201ENST00000318607 SOD1P00441 154 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 HLA-DMAP28067 261 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 BLVRAP53004 296 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 OR12D2P58182 307 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 LTB4RQ15722 352 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 NDUFAF5Q5TEU4 345 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 CDC73Q6P1J9 531 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 ZNF782Q6ZMW2 699 aaPredicted RBP13.32□□□□□ -0.28
PABPC1-201ENST00000318607 RD3Q7Z3Z2 195 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 TMEFF1Q8IYR6 380 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 RELL2Q8NC24 303 aaPredicted RBP13.32□□□□□ -0.28
PABPC1-201ENST00000318607 FBXO15Q8NCQ5 510 aaPredicted RBP13.32□□□□□ -0.28
PABPC1-201ENST00000318607 MNTQ99583 582 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 ZCCHC2Q9C0B9 1178 aaKnown RBP13.32□□□□□ -0.28
PABPC1-201ENST00000318607 MGAT4CQ9UBM8 478 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 H0YIV9 168 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 PROM1O43490 865 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 ARHGEF15O94989 841 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 MPC2O95563 127 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 H2AFB2P0C5Z0 115 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 HOXB6P17509 224 aaKnown RBP13.32□□□□□ -0.28
PABPC1-201ENST00000318607 LCN1P31025 176 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 PITPNBP48739 271 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 ST3GAL2Q16842 350 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 LGALSLQ3ZCW2 172 aaPredicted RBP13.32□□□□□ -0.28
PABPC1-201ENST00000318607 GGTA1PQ4G0N0 100 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 ASTLQ6HA08 431 aaPredicted RBP13.32□□□□□ -0.28
PABPC1-201ENST00000318607 GDPGP1Q6ZNW5 385 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 OR52B4Q8NGK2 314 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 OR8S1Q8NH09 359 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 MOSPD2Q8NHP6 518 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 KCTD12Q96CX2 325 aaKnown RBP13.32□□□□□ -0.28
PABPC1-201ENST00000318607 ZNF354BQ96LW1 612 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 ALG8Q9BVK2 526 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 A4GNTQ9UNA3 340 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 SLC45A1Q9Y2W3 748 aa13.32□□□□□ -0.28
PABPC1-201ENST00000318607 RP1P56715 2156 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 ERI3O43414 337 aaKnown RBP13.31□□□□□ -0.28
PABPC1-201ENST00000318607 PRICKLE3O43900 615 aaPredicted RBP13.31□□□□□ -0.28
PABPC1-201ENST00000318607 RASGRP1O95267 797 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 RAF1P04049 648 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 ZNF770Q6IQ21 691 aaPredicted RBP13.31□□□□□ -0.28
PABPC1-201ENST00000318607 TMEM65Q6PI78 240 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 FGD2Q7Z6J4 655 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 ADGRF3Q8IZF5 1079 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 ZNF461Q8TAF7 563 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 TMEM163Q8TC26 289 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 CXorf58Q96LI9 332 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms