RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 ZNF91Q05481 1191 aa13.25□□□□□ -0.29
VRK3-201ENST00000316763 FUT5Q11128 374 aa13.25□□□□□ -0.29
VRK3-201ENST00000316763 GINS1Q14691 196 aa13.25□□□□□ -0.29
VRK3-201ENST00000316763 SHBQ15464 509 aa13.25□□□□□ -0.29
VRK3-201ENST00000316763 SPHARQ15513 63 aa13.25□□□□□ -0.29
VRK3-201ENST00000316763 ZNF750Q32MQ0 723 aa13.25□□□□□ -0.29
VRK3-201ENST00000316763 ZNF311Q5JNZ3 666 aa13.25□□□□□ -0.29
VRK3-201ENST00000316763 ENTPD8Q5MY95 495 aa13.25□□□□□ -0.29
VRK3-201ENST00000316763 ATCAYQ86WG3 371 aa13.25□□□□□ -0.29
VRK3-201ENST00000316763 SNX29P2Q8IUI4 249 aa13.25□□□□□ -0.29
VRK3-201ENST00000316763 GNPDA2Q8TDQ7 276 aa13.25□□□□□ -0.29
VRK3-201ENST00000316763 ITPKCQ96DU7 683 aa13.25□□□□□ -0.29
VRK3-201ENST00000316763 ELP4Q96EB1 424 aa13.25□□□□□ -0.29
VRK3-201ENST00000316763 OTUB1Q96FW1 271 aaPredicted RBP13.25□□□□□ -0.29
VRK3-201ENST00000316763 NEURL2Q9BR09 285 aa13.25□□□□□ -0.29
VRK3-201ENST00000316763 TAPBPLQ9BX59 468 aa13.25□□□□□ -0.29
VRK3-201ENST00000316763 IL21RQ9HBE5 538 aa13.25□□□□□ -0.29
VRK3-201ENST00000316763 HRASLS2Q9NWW9 162 aa13.25□□□□□ -0.29
VRK3-201ENST00000316763 CHCHD3Q9NX63 227 aaKnown RBP13.25□□□□□ -0.29
VRK3-201ENST00000316763 CRNNQ9UBG3 495 aaPredicted RBP13.25□□□□□ -0.29
VRK3-201ENST00000316763 GMEB2Q9UKD1 530 aa13.25□□□□□ -0.29
VRK3-201ENST00000316763 IRGMA1A4Y4 181 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 GSAPA4D1B5 854 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 LILRA5A6NI73 299 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 SNTNA6NMZ2 147 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 MYL12BO14950 172 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 TLX2O43763 284 aaPredicted RBP13.24□□□□□ -0.29
VRK3-201ENST00000316763 TP53P04637 393 aaPredicted RBP13.24□□□□□ -0.29
VRK3-201ENST00000316763 SYPP08247 313 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 NR2F6P10588 404 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 GIPRP48546 466 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 CEBPEQ15744 281 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 DEFB133Q30KQ1 61 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 C16orf62Q7Z3J2 963 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 ZER1Q7Z7L7 766 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 TRIM73Q86UV7 250 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 COMTD1Q86VU5 262 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 SLC22A16Q86VW1 577 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 ZNF761Q86XN6 746 aaPredicted RBP13.24□□□□□ -0.29
VRK3-201ENST00000316763 SAMD14Q8IZD0 417 aaPredicted RBP13.24□□□□□ -0.29
VRK3-201ENST00000316763 SLC25A45Q8N413 288 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 MORN4Q8NDC4 146 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 PROKR2Q8NFJ6 384 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 OR2I1PQ8NGU4 316 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 C16orf58Q96GQ5 468 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 OPALINQ96PE5 141 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 ACTRT3Q9BYD9 372 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 RNF167Q9H6Y7 350 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 GAREM1Q9H706 876 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 SP140LQ9H930 580 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 SYNPO2LQ9H987 977 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 CACYBPQ9HB71 228 aaKnown RBP13.24□□□□□ -0.29
VRK3-201ENST00000316763 ABCB10Q9NRK6 738 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 MAN2C1Q9NTJ4 1040 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 KLHL28Q9NXS3 571 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 SEC14L4Q9UDX3 406 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 ZNF229Q9UJW7 825 aa13.24□□□□□ -0.29
VRK3-201ENST00000316763 LSM2Q9Y333 95 aaKnown RBP13.24□□□□□ -0.29
VRK3-201ENST00000316763 DUXAA6NLW8 204 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 AGR2O95994 175 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 ADRA2AP08913 450 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 ZNF806P0C7X5 589 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 MAGP20916 626 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 PSMA1P25786 263 aaKnown RBP13.23□□□□□ -0.29
VRK3-201ENST00000316763 MC3RP41968 323 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 LSSP48449 732 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 CDK5Q00535 292 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 DUSP2Q05923 314 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 SPEM2Q0P670 501 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 KRR1Q13601 381 aaKnown RBP13.23□□□□□ -0.29
VRK3-201ENST00000316763 DNASE1L3Q13609 305 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 TRAM2Q15035 370 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 SSX1Q16384 188 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 KLHL22Q53GT1 634 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 SOWAHCQ53LP3 525 aaPredicted RBP13.23□□□□□ -0.29
VRK3-201ENST00000316763 SPANXN2Q5MJ10 180 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 AGAP7PQ5VUJ5 663 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 RRM2BQ7LG56 351 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 OLIG3Q7RTU3 272 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 ASPGQ86U10 573 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 OOSP2Q86WS3 158 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 NANOGP1Q8N7R0 232 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 OR9A2Q8NGT5 310 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 TEX47Q8TBZ9 253 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 RNF217Q8TC41 542 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 ARHGDIGQ99819 225 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.23□□□□□ -0.29
VRK3-201ENST00000316763 PRRG3Q9BZD7 231 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 NUAK2Q9H093 628 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 EQTNQ9NQ60 294 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 KLHL3Q9UH77 587 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 PHF11Q9UIL8 331 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 PILRAQ9UKJ1 303 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 A0A1B0GTQ1 180 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 CSO75390 466 aaKnown RBP13.23□□□□□ -0.29
VRK3-201ENST00000316763 CYP7B1O75881 506 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 RAB36O95755 333 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 EPPINO95925 133 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 GIMD1P0DJR0 217 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 CKMT1AP12532 417 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms