RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 DEFA4P12838 97 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 ACBD7Q8N6N7 88 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 FAM213BQ8TBF2 198 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 KCNMB3Q9NPA1 279 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 DDNO94850 711 aaPredicted RBP12.74□□□□□ -0.37
TRIM56-201ENST00000306085 CBX7O95931 251 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 POLR2CP19387 275 aaPredicted RBP12.74□□□□□ -0.37
TRIM56-201ENST00000306085 IL20RBQ6UXL0 311 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 OR4K13Q8NH42 304 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 RBM24Q9BX46 236 aaKnown RBP12.74□□□□□ -0.37
TRIM56-201ENST00000306085 SMOXQ9NWM0 555 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 KCNK6Q9Y257 313 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 METTL15P1P0C7V9 234 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 TFGQ92734 400 aaPredicted RBP12.73□□□□□ -0.37
TRIM56-201ENST00000306085 HAS1Q92839 578 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 TLCD1Q96CP7 247 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 ELF4Q99607 663 aaPredicted RBP12.73□□□□□ -0.37
TRIM56-201ENST00000306085 BCL7BQ9BQE9 202 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 ACTRT3Q9BYD9 372 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 WASH6PQ9NQA3 447 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 MTCH1Q9NZJ7 389 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 KRBOX1C9JBD0 128 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 ITGB5P18084 799 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 IL22RA1Q8N6P7 574 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 V9GYS6 101 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 EDDM13A0A1B0GTR0 161 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 HSPB6O14558 160 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 TOR1AO14656 332 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 TMEM63AO94886 807 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 GABRA4P48169 554 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 C15orf54Q8N8G6 183 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 OR52H1Q8NGJ2 320 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 FAM71F1Q96KD3 344 aaPredicted RBP12.73□□□□□ -0.37
TRIM56-201ENST00000306085 BIRC8Q96P09 236 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 DEFB126Q9BYW3 111 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 ZNF160Q9HCG1 818 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 B4GALT4O60513 344 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 ARSBP15848 533 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 FAM214AQ32MH5 1076 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 PLCXD3Q63HM9 321 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 ESPNLQ6ZVH7 1005 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 ZNF546Q86UE3 836 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 CMTM2Q8TAZ6 248 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 TEPSINQ96N21 525 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 OR52A5Q9H2C5 316 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 GALPQ9UBC7 116 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 GJE1A6NN92 205 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 C8AP07357 584 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 RAB3AP20336 220 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 PKLRP30613 574 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 MTNR1AP48039 350 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 PLA2G7Q13093 441 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 GPR33Q49SQ1 333 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 PRRT1Q99946 306 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 A0A087WZY1 265 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 A0A0B4J2A0 478 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 LTC4SQ16873 150 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 DESI1Q6ICB0 168 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 PRSS55Q6UWB4 352 aaPredicted RBP12.73□□□□□ -0.37
TRIM56-201ENST00000306085 RNF111Q6ZNA4 994 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 TEX26Q8N6G2 289 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 OR4C5Q8NGB2 326 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 FAM103A1Q9BTL3 118 aaKnown RBP12.73□□□□□ -0.37
TRIM56-201ENST00000306085 DZANK1Q9NVP4 752 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 SHPKQ9UHJ6 478 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 PCDHGA1Q9Y5H4 931 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 CRYM-AS1A6NIL9 109 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 MSTNO14793 375 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 NUDT21O43809 227 aaKnown RBP12.73□□□□□ -0.37
TRIM56-201ENST00000306085 GPR137BO60478 399 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 IL4RP24394 825 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 GSK3AP49840 483 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 AGTR2P50052 363 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 BAXQ07812 192 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 KCNAB2Q13303 367 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 PTPRCAPQ14761 206 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 MSMO1Q15800 293 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 NICN1Q9BSH3 213 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 USP36Q9P275 1121 aaKnown RBP12.73□□□□□ -0.37
TRIM56-201ENST00000306085 CLTCQ00610 1675 aaKnown RBP12.73□□□□□ -0.37
TRIM56-201ENST00000306085 SPATA31C2B4DYI2 1134 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 ZNF92Q03936 586 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 HMGN3Q15651 99 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 ZNF791Q3KP31 576 aaPredicted RBP12.73□□□□□ -0.37
TRIM56-201ENST00000306085 EXOSC6Q5RKV6 272 aaKnown RBP12.73□□□□□ -0.37
TRIM56-201ENST00000306085 GAB2Q9UQC2 676 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 PLSCR5A0PG75 271 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 POP7O75817 140 aaKnown RBP12.73□□□□□ -0.37
TRIM56-201ENST00000306085 HOXB5P09067 269 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 GCH1P30793 250 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 RPS24P62847 133 aaKnown RBP12.73□□□□□ -0.37
TRIM56-201ENST00000306085 RFTN1Q14699 578 aaPredicted RBP12.73□□□□□ -0.37
TRIM56-201ENST00000306085 PPP1R3AQ16821 1122 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 NIPSNAP3BQ9BS92 247 aa12.73□□□□□ -0.37
TRIM56-201ENST00000306085 SYN3O14994 580 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 ETV4P43268 484 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 ADIRFQ15847 76 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 SGTBQ96EQ0 304 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 H3BMQ9 156 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 J3KR12 359 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms