RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 LIX1LQ8IVB5 337 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 PDZD9Q8IXQ8 264 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 GATAD2BQ8WXI9 593 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 RAD51AP1Q96B01 352 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 REPS1Q96D71 796 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 WDR92Q96MX6 357 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 PKP4Q99569 1192 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 GABRG3Q99928 467 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 APOOQ9BUR5 198 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 TEX12Q9BXU0 123 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 FXYD6Q9H0Q3 95 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 POLR2J3Q9H1A7 115 aaKnown RBP10.26□□□□□ -0.77
LSM3-201ENST00000306024 ACTL8Q9H568 366 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 METTL17Q9H7H0 456 aaPredicted RBP10.26□□□□□ -0.77
LSM3-201ENST00000306024 MBNL1Q9NR56 388 aaKnown RBP10.26□□□□□ -0.77
LSM3-201ENST00000306024 MED11Q9P086 117 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 MANBAO00462 879 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 PGRMC2O15173 223 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 CSO75390 466 aaKnown RBP10.26□□□□□ -0.77
LSM3-201ENST00000306024 NCR1O76036 304 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 CSRP3P50461 194 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 CTAG1AP78358 180 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 ARMC6Q6NXE6 501 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 MBOAT1Q6ZNC8 495 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 CBLL1Q75N03 491 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 SAMD12Q8N8I0 201 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 TEX47Q8TBZ9 253 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 TSACCQ96A04 125 aaPredicted RBP10.26□□□□□ -0.77
LSM3-201ENST00000306024 CD244Q9BZW8 370 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 ARL6Q9H0F7 186 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 SLC2A4RGQ9NR83 387 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 SLC39A1Q9NY26 324 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 ZNF226Q9NYT6 803 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 OR6C2Q9NZP2 312 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 ASB1Q9Y576 335 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 RAB19A4D1S5 217 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 E2F3O00716 465 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 LAMTOR5O43504 91 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 CHP2O43745 196 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 RP2O75695 350 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 CLDN9O95484 217 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 LALBAP00709 142 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 IFNW1P05000 195 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 CELP19835 753 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 TRIM23P36406 574 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 TEAD4Q15561 434 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 UBALD2Q8IYN6 164 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 ADGRF3Q8IZF5 1079 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 FAM160A2Q8N612 972 aaPredicted RBP10.25□□□□□ -0.77
LSM3-201ENST00000306024 CLRN3Q8NCR9 226 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 SFXN2Q96NB2 322 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 SLC29A3Q9BZD2 475 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 SAP130Q9H0E3 1048 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 ZNF768Q9H5H4 540 aaKnown RBP10.25□□□□□ -0.77
LSM3-201ENST00000306024 CLMPQ9H6B4 373 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 SLC6A13Q9NSD5 602 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 TAS2R3Q9NYW6 316 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 ZNF225Q9UK10 706 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 DISC1C4P0D8 188 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 SYPP08247 313 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 JUPP14923 745 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 RHCEP18577 417 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 MAPK9P45984 424 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 PPP2CBP62714 309 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 PPP2CAP67775 309 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 FGL2Q14314 439 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 SUSD1Q6UWL2 747 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 WASH2PQ6VEQ5 465 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 MSRB3Q8IXL7 192 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 SYNPOQ8N3V7 929 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 TSNAXQ99598 290 aaKnown RBP10.25□□□□□ -0.77
LSM3-201ENST00000306024 THAP7Q9BT49 309 aaPredicted RBP10.25□□□□□ -0.77
LSM3-201ENST00000306024 CDCA4Q9BXL8 241 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 P2RY12Q9H244 342 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 SEMA3GQ9NS98 782 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 YARS2Q9Y2Z4 477 aaKnown RBP10.25□□□□□ -0.77
LSM3-201ENST00000306024 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 SULT1B1O43704 296 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 HMGN1P05114 100 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 GLAP06280 429 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 GIFP27352 417 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 CLCN7P51798 805 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 GPR176Q14439 515 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 XKR6Q5GH73 641 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 FAHD1Q6P587 224 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 GPR155Q7Z3F1 870 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 SLITRK4Q8IW52 837 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 GIMAP5Q96F15 307 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 OR2M4Q96R27 311 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 GINS4Q9BRT9 223 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 FUZQ9BT04 418 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 TMEM43Q9BTV4 400 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 SYNDIG1Q9H7V2 258 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 NANSQ9NR45 359 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 CORO2BQ9UQ03 480 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 CACNG2Q9Y698 323 aa10.25□□□□□ -0.77
LSM3-201ENST00000306024 TRBV5-4A0A0C4DH59 114 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 A0A1W2PQF6 199 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 SGTAO43765 313 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 PPIBP23284 216 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms