RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 CHD7Q9P2D1 2997 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 SCN3AQ9NY46 2000 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 OR10H2O60403 315 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 LDB3O75112 727 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 NTN1O95631 604 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 EGFP01133 1207 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 TP53P04637 393 aaPredicted RBP12.72□□□□□ -0.37
CDH8-201ENST00000299345 CPMP14384 443 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 PVRP15151 417 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 COL9A1P20849 921 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 TRHRP34981 398 aaPredicted RBP12.72□□□□□ -0.37
CDH8-201ENST00000299345 SLC9A3P48764 834 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 SCN1BQ07699 218 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 DUSP5Q16690 384 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 DECR1Q16698 335 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 FBXO42Q6P3S6 717 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 C19orf48Q6RUI8 117 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 GDF7Q7Z4P5 450 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 KLHL36Q8N4N3 616 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 TMEM255BQ8WV15 326 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 SECISBP2Q96T21 854 aaKnown RBP12.72□□□□□ -0.37
CDH8-201ENST00000299345 TMED9Q9BVK6 235 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 ANKRD19PQ9H560 264 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 HRASLS2Q9NWW9 162 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 TNFRSF10DQ9UBN6 386 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 AKAP8O43823 692 aaKnown RBP12.72□□□□□ -0.37
CDH8-201ENST00000299345 STX11O75558 287 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 CCNKO75909 580 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 SAGP10523 405 aaPredicted RBP12.72□□□□□ -0.37
CDH8-201ENST00000299345 SRP54P61011 504 aaKnown RBP12.72□□□□□ -0.37
CDH8-201ENST00000299345 OR4F15Q8NGB8 312 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 OR8D4Q8NGM9 314 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 ITFG2Q969R8 447 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 COMMD3Q9UBI1 195 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 DAPP1Q9UN19 280 aa12.72□□□□□ -0.37
CDH8-201ENST00000299345 YARS2Q9Y2Z4 477 aaKnown RBP12.72□□□□□ -0.37
CDH8-201ENST00000299345 TFECO14948 347 aaPredicted RBP12.71□□□□□ -0.37
CDH8-201ENST00000299345 NARSO43776 548 aaKnown RBP12.71□□□□□ -0.37
CDH8-201ENST00000299345 IL1AP01583 271 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 FPR3P25089 353 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 CTHP32929 405 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 TGM4P49221 684 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 RUNX2Q13950 521 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 GPR18Q14330 331 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 TRMT12Q53H54 448 aaKnown RBP12.71□□□□□ -0.37
CDH8-201ENST00000299345 SLC35F1Q5T1Q4 408 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 GDPD3Q7L5L3 318 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 CD180Q99467 661 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 SIAEQ9HAT2 523 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 ABCB9Q9NP78 766 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 PTGFRNQ9P2B2 879 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 A0A1W2PQL4 384 aaPredicted RBP12.71□□□□□ -0.37
CDH8-201ENST00000299345 APBB3O95704 486 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 CLEC2LP0C7M8 214 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 IFI30P13284 250 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 OR2B6P58173 313 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 RPS25P62851 125 aaKnown RBP12.71□□□□□ -0.37
CDH8-201ENST00000299345 PGGHGQ32M88 737 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 ZNF791Q3KP31 576 aaPredicted RBP12.71□□□□□ -0.37
CDH8-201ENST00000299345 PLK5Q496M5 336 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 FIGNL1Q6PIW4 674 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 MBOAT2Q6ZWT7 520 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 CPOQ8IVL8 374 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 TOR1AIP2Q8NFQ8 470 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 OR51G2Q8NGK0 314 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 MAT2BQ9NZL9 334 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 CDH10Q9Y6N8 788 aa12.71□□□□□ -0.37
CDH8-201ENST00000299345 TMEM129A0AVI4 362 aa12.71□□□□□ -0.38
CDH8-201ENST00000299345 GKN3PP0CG01 181 aa12.71□□□□□ -0.38
CDH8-201ENST00000299345 CTSEP14091 401 aa12.71□□□□□ -0.38
CDH8-201ENST00000299345 SPNP16150 400 aa12.71□□□□□ -0.38
CDH8-201ENST00000299345 CPEP16870 476 aa12.71□□□□□ -0.38
CDH8-201ENST00000299345 NOS3P29474 1203 aa12.71□□□□□ -0.38
CDH8-201ENST00000299345 SHC2P98077 582 aa12.71□□□□□ -0.38
CDH8-201ENST00000299345 ZNF155Q12901 538 aaPredicted RBP12.71□□□□□ -0.38
CDH8-201ENST00000299345 SLC25A30Q5SVS4 291 aa12.71□□□□□ -0.38
CDH8-201ENST00000299345 FRRS1Q6ZNA5 592 aa12.71□□□□□ -0.38
CDH8-201ENST00000299345 PSD4Q8NDX1 1056 aa12.71□□□□□ -0.38
CDH8-201ENST00000299345 SYNPO2LQ9H987 977 aa12.71□□□□□ -0.38
CDH8-201ENST00000299345 NPIPA5A0A0B4J1W7 369 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 TRAPPC13A5PLN9 417 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 FAM86C2PA6NEL3 165 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 C2orf74A8MZ97 194 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 NPIPA7E9PJI5 369 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 H0YGG7 62 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 PIP5K1CO60331 668 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 CTSVO60911 334 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 HLA-DPB1P04440 258 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 DBIP07108 87 aaKnown RBP12.7□□□□□ -0.38
CDH8-201ENST00000299345 NPIPA8P0DM63 369 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 ARF3P61204 181 aaPredicted RBP12.7□□□□□ -0.38
CDH8-201ENST00000299345 RNLSQ5VYX0 342 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 SPATC1Q76KD6 591 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 TAF8Q7Z7C8 310 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 MARCH9Q86YJ5 346 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 HMGB4Q8WW32 186 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 TRMT61AQ96FX7 289 aaKnown RBP12.7□□□□□ -0.38
CDH8-201ENST00000299345 SDF2Q99470 211 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 GABRG3Q99928 467 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 HDHD5Q9BXW7 423 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms