RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 METTL17Q9H7H0 456 aaPredicted RBP14.1□□□□□ -0.15
SCN3B-201ENST00000299333 TESQ9UGI8 421 aaKnown RBP14.1□□□□□ -0.15
SCN3B-201ENST00000299333 FAM171A2A8MVW0 826 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 NFAT5O94916 1531 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 TMEM225BP0DP42 221 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 PPT1P50897 306 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 SH3BP2P78314 561 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 ACY1Q03154 408 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 ZNF33BQ06732 778 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.09□□□□□ -0.15
SCN3B-201ENST00000299333 WFIKKN2Q8TEU8 576 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 C2CD4CQ8TF44 421 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 SAMD8Q96LT4 415 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 NAA50Q9GZZ1 169 aaKnown RBP14.09□□□□□ -0.15
SCN3B-201ENST00000299333 SLC28A3Q9HAS3 691 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 ASB3Q9Y575 518 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 PUS1Q9Y606 427 aaKnown RBP eCLIP14.09□□□□□ -0.15
SCN3B-201ENST00000299333 FANCGO15287 622 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 SGSHP51688 502 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 CLDN8P56748 225 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 UBE2KP61086 200 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 MLC1Q15049 377 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 OR4D1Q15615 310 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 GTDC1Q4AE62 458 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 AVL9Q8NBF6 648 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 IL17RDQ8NFM7 739 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 TMEM234Q8WY98 164 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 PIGBOS1A0A0B4J2F0 54 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 E7ESA3 106 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 PRAMEF11O60813 436 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 PPP1R3DO95685 299 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 MT-CO2P00403 227 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 DLX5P56178 289 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 NKX3-2P78367 333 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 NPY5RQ15761 445 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 AGAP7PQ5VUJ5 663 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 DTWD1Q8N5C7 304 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 STEAP2Q8NFT2 490 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 SEMA6DQ8NFY4 1073 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 GIMAP1Q8WWP7 306 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 BCO2Q9BYV7 579 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 ARGFXA6NJG6 315 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 PHYHO14832 338 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 JRKO75564 520 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 TNFP01375 233 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 PSPHP78330 225 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 SLC35F2Q8IXU6 374 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 SIMC1Q8NDZ2 872 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 C16orf78Q8WTQ4 265 aa14.09□□□□□ -0.15
SCN3B-201ENST00000299333 C9J4A7 227 aa14.08□□□□□ -0.15
SCN3B-201ENST00000299333 KRBOX1C9JBD0 128 aa14.08□□□□□ -0.15
SCN3B-201ENST00000299333 ASGR2P07307 311 aa14.08□□□□□ -0.15
SCN3B-201ENST00000299333 TMEM115Q12893 351 aaPredicted RBP14.08□□□□□ -0.15
SCN3B-201ENST00000299333 RPS26P11Q5JNZ5 115 aaPredicted RBP14.08□□□□□ -0.15
SCN3B-201ENST00000299333 FIGNL1Q6PIW4 674 aa14.08□□□□□ -0.15
SCN3B-201ENST00000299333 ZNF551Q7Z340 670 aaPredicted RBP14.08□□□□□ -0.15
SCN3B-201ENST00000299333 NRARPQ7Z6K4 114 aa14.08□□□□□ -0.15
SCN3B-201ENST00000299333 OR4C5Q8NGB2 326 aa14.08□□□□□ -0.15
SCN3B-201ENST00000299333 CLEC4DQ8WXI8 215 aa14.08□□□□□ -0.15
SCN3B-201ENST00000299333 LDAHQ9H6V9 325 aa14.08□□□□□ -0.15
SCN3B-201ENST00000299333 RLIMQ9NVW2 624 aa14.08□□□□□ -0.15
SCN3B-201ENST00000299333 BACE2Q9Y5Z0 518 aa14.08□□□□□ -0.15
SCN3B-201ENST00000299333 A6NLC8 198 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 PPP1R2P9O14990 202 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 MRPS14O60783 128 aaKnown RBP14.08□□□□□ -0.16
SCN3B-201ENST00000299333 S1PR4O95977 384 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 SLC5A2P31639 672 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 ECH1Q13011 328 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 CPOQ8IVL8 374 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 OR51D1Q8NGF3 324 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 ATG12O94817 140 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 HTR3BO95264 441 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 THBS2P35442 1172 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 TAP2Q03519 686 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 CRHR2Q13324 411 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 ZNF596Q8TC21 504 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 F2RL3Q96RI0 385 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 SGIP1Q9BQI5 828 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 INPP5KQ9BT40 448 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 NT5DC2Q9H857 520 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 MPIG6BO95866 241 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 PDGFAP04085 211 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 TYRP1P17643 537 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 RAB3AP20336 220 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 ETV3P41162 512 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 KREMEN2Q8NCW0 462 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 RHOXF1Q8NHV9 184 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 BRIX1Q8TDN6 353 aaKnown RBP14.08□□□□□ -0.16
SCN3B-201ENST00000299333 SPIN2AQ99865 258 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 SPIN2BQ9BPZ2 258 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 OCSTAMPQ9BR26 566 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 CNIH4Q9P003 139 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 ENPP4Q9Y6X5 453 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 A0A0D9SEW6 157 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 VSTM5A8MXK1 200 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 CTDSP2O14595 271 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 RAC2P15153 192 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 POLR2CP19387 275 aaPredicted RBP14.08□□□□□ -0.16
SCN3B-201ENST00000299333 ZNF33AQ06730 810 aa14.08□□□□□ -0.16
SCN3B-201ENST00000299333 P2RY14Q15391 338 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms