RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 ZNF136P52737 540 aa23.8■■□□□ 1.4
SDCCAG3-201ENST00000298537 NUDT6P53370 316 aa23.8■■□□□ 1.4
SDCCAG3-201ENST00000298537 MINDY4Q4G0A6 757 aa23.8■■□□□ 1.4
SDCCAG3-201ENST00000298537 MRPL2Q5T653 305 aaKnown RBP23.8■■□□□ 1.4
SDCCAG3-201ENST00000298537 GPR141Q7Z602 305 aa23.8■■□□□ 1.4
SDCCAG3-201ENST00000298537 PARP8Q8N3A8 854 aa23.8■■□□□ 1.4
SDCCAG3-201ENST00000298537 C16orf52Q8NHV5 167 aa23.8■■□□□ 1.4
SDCCAG3-201ENST00000298537 HOXB13Q92826 284 aaPredicted RBP23.8■■□□□ 1.4
SDCCAG3-201ENST00000298537 LMF1Q96S06 567 aa23.8■■□□□ 1.4
SDCCAG3-201ENST00000298537 MCHR1Q99705 422 aa23.8■■□□□ 1.4
SDCCAG3-201ENST00000298537 UCK2Q9BZX2 261 aa23.8■■□□□ 1.4
SDCCAG3-201ENST00000298537 SAP130Q9H0E3 1048 aa23.8■■□□□ 1.4
SDCCAG3-201ENST00000298537 C11orf16Q9NQ32 467 aa23.8■■□□□ 1.4
SDCCAG3-201ENST00000298537 NDUFA13Q9P0J0 144 aa23.8■■□□□ 1.4
SDCCAG3-201ENST00000298537 SATB2Q9UPW6 733 aa23.8■■□□□ 1.4
SDCCAG3-201ENST00000298537 HSPE1-MOB4S4R3N1 261 aa23.8■■□□□ 1.4
SDCCAG3-201ENST00000298537 ASCC3Q8N3C0 2202 aaKnown RBP23.8■■□□□ 1.4
SDCCAG3-201ENST00000298537 BRINP1O60477 761 aa23.79■■□□□ 1.4
SDCCAG3-201ENST00000298537 SLITRK5O94991 958 aa23.79■■□□□ 1.4
SDCCAG3-201ENST00000298537 RPS4Y1P22090 263 aaKnown RBP23.79■■□□□ 1.4
SDCCAG3-201ENST00000298537 PEX19P40855 299 aa23.79■■□□□ 1.4
SDCCAG3-201ENST00000298537 MAPK10P53779 464 aa23.79■■□□□ 1.4
SDCCAG3-201ENST00000298537 CRISP1P54107 249 aa23.79■■□□□ 1.4
SDCCAG3-201ENST00000298537 HSD17B7P56937 341 aa23.79■■□□□ 1.4
SDCCAG3-201ENST00000298537 NR0B2Q15466 257 aa23.79■■□□□ 1.4
SDCCAG3-201ENST00000298537 ZNF566Q969W8 418 aa23.79■■□□□ 1.4
SDCCAG3-201ENST00000298537 CYP7B1O75881 506 aa23.79■■□□□ 1.4
SDCCAG3-201ENST00000298537 ADAP00813 363 aa23.79■■□□□ 1.4
SDCCAG3-201ENST00000298537 RPLP0P05388 317 aaKnown RBP23.79■■□□□ 1.4
SDCCAG3-201ENST00000298537 CCDC159P0C7I6 412 aa23.79■■□□□ 1.4
SDCCAG3-201ENST00000298537 CCNYL3P0C7X3 344 aa23.79■■□□□ 1.4
SDCCAG3-201ENST00000298537 PCSK6P29122 969 aa23.79■■□□□ 1.4
SDCCAG3-201ENST00000298537 ZCCHC12Q6PEW1 402 aa23.79■■□□□ 1.4
SDCCAG3-201ENST00000298537 CLVS1Q8IUQ0 354 aaPredicted RBP23.79■■□□□ 1.4
SDCCAG3-201ENST00000298537 CNDP2Q96KP4 475 aaKnown RBP23.79■■□□□ 1.4
SDCCAG3-201ENST00000298537 TSC22D3Q99576 134 aa23.79■■□□□ 1.4
SDCCAG3-201ENST00000298537 ZNF768Q9H5H4 540 aaKnown RBP23.79■■□□□ 1.4
SDCCAG3-201ENST00000298537 PNO1Q9NRX1 252 aaKnown RBP23.79■■□□□ 1.4
SDCCAG3-201ENST00000298537 CNR2P34972 360 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 MAP2K4P45985 399 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 SLC35A2P78381 396 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 LAPTM4BQ86VI4 370 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 GPR135Q8IZ08 494 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 LMF2Q9BU23 707 aaKnown RBP23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 DUSP23Q9BVJ7 150 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 OR10A5Q9H207 317 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 IFT52Q9Y366 437 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 COQ9O75208 318 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 CPNE6O95741 557 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 GABRB1P18505 474 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 NUP107P57740 925 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 GABARAPL2P60520 117 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 MVKQ03426 396 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 LARS2Q15031 903 aaKnown RBP23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 PROX2Q3B8N5 592 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 NIPAL1Q6NVV3 410 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 TMEM71Q6P5X7 295 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 PRICKLE2Q7Z3G6 844 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 IQCF1Q8N6M8 205 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 ZNF614Q8N883 585 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 RHOXF1Q8NHV9 184 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 NODALQ96S42 347 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 ITPAQ9BY32 194 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 LHPPQ9H008 270 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 KLHL28Q9NXS3 571 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 MGAT4BQ9UQ53 548 aa23.78■■□□□ 1.4
SDCCAG3-201ENST00000298537 ZAR1LA6NP61 321 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 FAM20BO75063 409 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 TIAF1O95411 115 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 OXSR1O95747 527 aaPredicted RBP23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 TNNI3P19429 210 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 HTR2AP28223 471 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 SLC5A2P31639 672 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 RPS6KA3P51812 740 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 UGT2B15P54855 530 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 TOP3AQ13472 1001 aaPredicted RBP23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 ZBED5Q49AG3 693 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 BORAQ6PGQ7 559 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 SHISA6Q6ZSJ9 500 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 PLEKHM3Q6ZWE6 761 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 ZNF540Q8NDQ6 660 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 ADAMTS18Q8TE60 1221 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 PTPMT1Q8WUK0 201 aaPredicted RBP23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 DPYSL5Q9BPU6 564 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 NDC1Q9BTX1 674 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 POLR2J3Q9H1A7 115 aaKnown RBP23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 CNIH4Q9P003 139 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 ZNF232Q9UNY5 417 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 C17orf105B2RV13 164 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 ADAM11O75078 769 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 CT45A8P0DMV1 189 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 CT45A9P0DMV2 189 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 SMIM11AP58511 58 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 CT45A2Q5DJT8 189 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 PDZK1Q5T2W1 519 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 GDF7Q7Z4P5 450 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 ZNF615Q8N8J6 731 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 SLC38A9Q8NBW4 561 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 MESP1Q9BRJ9 268 aa23.77■■□□□ 1.4
SDCCAG3-201ENST00000298537 DGCR6LQ9BY27 220 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms