RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 NEURL3Q96EH8 262 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 SLC35A4Q96G79 324 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 ART5Q96L15 291 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 DOCK7Q96N67 2140 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 MS4A4EQ96PG1 132 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 SIGLEC12Q96PQ1 595 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 GAL3ST4Q96RP7 486 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 RASL10BQ96S79 203 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 PRPF18Q99633 342 aaKnown RBP5.43□□□□□ -1.54
SSX3-201ENST00000298396 CPPED1Q9BRF8 314 aaPredicted RBP5.43□□□□□ -1.54
SSX3-201ENST00000298396 SLC39A3Q9BRY0 314 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 SLC35A5Q9BS91 424 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 SLC25A23Q9BV35 468 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 RSPO3Q9BXY4 272 aaPredicted RBP5.43□□□□□ -1.54
SSX3-201ENST00000298396 HES7Q9BYE0 225 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 TRIM45Q9H8W5 580 aaPredicted RBP5.43□□□□□ -1.54
SSX3-201ENST00000298396 PROK2Q9HC23 129 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 ZCCHC3Q9NUD5 404 aaKnown RBP5.43□□□□□ -1.54
SSX3-201ENST00000298396 DDX18Q9NVP1 670 aaKnown RBP5.43□□□□□ -1.54
SSX3-201ENST00000298396 FBXO34Q9NWN3 711 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 ANKRD10Q9NXR5 420 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 FLRT3Q9NZU0 649 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 MYOTQ9UBF9 498 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 COPS7AQ9UBW8 275 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 SNX8Q9Y5X2 465 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 CAPN7Q9Y6W3 813 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 ZNF462Q96JM2 2506 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 PHF3Q92576 2039 aaKnown RBP5.43□□□□□ -1.54
SSX3-201ENST00000298396 MYO7BQ6PIF6 2116 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 INTS1Q8N201 2190 aaKnown RBP5.42□□□□□ -1.54
SSX3-201ENST00000298396 LOC100653049A0A140TA62 436 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 C2orf92A0A1B0GVN3 265 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 FRG2CA6NGY1 282 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 C17orf51A8MQB3 221 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 HMGN4O00479 90 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 RFXANKO14593 260 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 TO15178 435 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 TSPAN2O60636 221 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 BCAS2O75934 225 aaPredicted RBP5.42□□□□□ -1.54
SSX3-201ENST00000298396 KRT34O76011 436 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 NEURL1O76050 574 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 ZFAND5O76080 213 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 NKX2-2O95096 273 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 CBX6O95503 412 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 ZCCHC18P0CG32 403 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 T-ENOLP0DO92 83 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 ABCD3P28288 659 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 ADSLP30566 484 aaPredicted RBP5.42□□□□□ -1.54
SSX3-201ENST00000298396 SOAT1P35610 550 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 CD96P40200 585 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 PTGDSP41222 190 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 PPICP45877 212 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 TRPC1P48995 793 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 GZMMP51124 257 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 NR0B1P51843 470 aaKnown RBP5.42□□□□□ -1.54
SSX3-201ENST00000298396 PRKAG1P54619 331 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 FBXW4P57775 412 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 RHDQ02161 417 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 TP53BP2Q13625 1128 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 CAPRIN1Q14444 709 aaKnown RBP5.42□□□□□ -1.54
SSX3-201ENST00000298396 ADRM1Q16186 407 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 MAPKAPK3Q16644 382 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 MEP1AQ16819 746 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 RUNDC3AQ59EK9 446 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.42□□□□□ -1.54
SSX3-201ENST00000298396 GKAP1Q5VSY0 366 aaPredicted RBP5.42□□□□□ -1.54
SSX3-201ENST00000298396 AGAP7PQ5VUJ5 663 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 BICRALQ6AI39 1079 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 CDC73Q6P1J9 531 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 TNFAIP8L2Q6P589 184 aaPredicted RBP5.42□□□□□ -1.54
SSX3-201ENST00000298396 IGFL3Q6UXB1 125 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 ISLR2Q6UXK2 745 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 SLC29A4Q7RTT9 530 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 MDGA2Q7Z553 956 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 DHDDSQ86SQ9 333 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 GALNT10Q86SR1 603 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 SLC44A2Q8IWA5 706 aaPredicted RBP5.42□□□□□ -1.54
SSX3-201ENST00000298396 SLC34A3Q8N130 599 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 LGI4Q8N135 537 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 BCORP1Q8N888 145 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 Q8NA96 180 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 CCDC197Q8NCU1 140 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 CATSPER1Q8NEC5 780 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 C7orf57Q8NEG2 295 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 C17orf47Q8NEP4 570 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 OR56A1Q8NGH5 318 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 FAM110BQ8TC76 370 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 PNPT1Q8TCS8 783 aaKnown RBP5.42□□□□□ -1.54
SSX3-201ENST00000298396 BCAS4Q8TDM0 211 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 CDS1Q92903 461 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 HGDQ93099 445 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 TMBIM1Q969X1 311 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 OMA1Q96E52 524 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 ITCHQ96J02 903 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 VPS50Q96JG6 964 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 LCORQ96JN0 433 aaPredicted RBP5.42□□□□□ -1.54
SSX3-201ENST00000298396 SLC35G5Q96KT7 338 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 AGAP4Q96P64 663 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 OR7D2Q96RA2 312 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 PANX1Q96RD7 426 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms